Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod10g1731 ATGGTTTTTGCATTAGCCAGCATATGGACCCTGATCCTTGCATTTGGCTGTTCAGCATGTATTGGGCCAATATGGTACACAGTCAGCATGGTGTATCAAAAAACATTCGATTCAGGATCATCAATTGGTAGCCAGGCATCAGGACTAGAGTTTCTTTCCATGGTGAATAGCTTAATCTTAATGGCACTGGGTTTTGTCATTGGCTACCCGGTTACTTCAGCTTCAGTTAAGGCGCTTCAAGGCCAGCGTAGGAATGACTTGGTGGCACTAAAGGGTTCTTGTCCAAATTGTGGAGAAGAGGTATTTGCATTTGTAACAATGGACAACGCTAATCACTCACCCCATAGAGCAAATTGTCATGTGTGTGAGTGCTTGTTAGAATTTCGCACCAAAGCCGAGAAATCGGTTTCAAGATTTGGTAGAAGATGGGTTTATGGCCGTATTTACCTTGTTGGTAGATCCAGACGCCGAAGGGAGCTATAA 483 0.4389 MVFALASIWTLILAFGCSACIGPIWYTVSMVYQKTFDSGSSIGSQASGLEFLSMVNSLILMALGFVIGYPVTSASVKALQGQRRNDLVALKGSCPNCGEEVFAFVTMDNANHSPHRANCHVCECLLEFRTKAEKSVSRFGRRWVYGRIYLVGRSRRRREL* 161
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod10g1731 160 PANTHER PGR5-LIKE A PROTEIN 1 157 - -
Dod10g1731 160 PANTHER PGR5-LIKE PROTEIN 1B, CHLOROPLASTIC 1 157 IPR039987 GO:0009535|GO:0009773|GO:0016730
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod10g1731 Dod-Chr10 38436139 38437059 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod10g1731 - - adu:107461661 260.766
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod10g1731 10 38436139 38437059 Dod10g1731 10 38436139 38437059 ECH
Dod10g1731 10 38436139 38437059 Dod03g2939 03 61633554 61636854 PCT