Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod10g1646 ATGAGAACCACCAACCACTTGATCGGTCTACTGAACTTCTTGACCTTCCTGCTCTCAGTTCCGATCCTCGGTGGCGGCATATGGCTGAGCAGCAGGGCCAACAACACCGACTGCCTCCAGTTCCTACAGTGGCCCTTAATCATCATCGGCGTTGCCATCATGGTCATCTCCCTAGCGGGTTTCGCGGGCGCGTGTTACCGCAACACGTTCCTCATGAGGCTCTACCTCGTTGTCATGTTCTTCATCATCGCTGTCCTCATCGGCTTCATTGTCTTCGCCTACGTTGTCACCGACAAGGGATCCGGTCGGGTCGTGCCCAACAGGGCTTACTTGGATTATTACCTGCAGGACTATTCCGGGTGGCTGGAGGAGCGCGTGGCCAGTGATAGCTACTGGGGCAAGATAAGCTCTTGTATTAGGGACTCTAAGGTTTGTAGTAAGCTTGGGAGATCAACAACACTTGGTGGTGTCCCTGAAACTGCTGATATGTTCTACCGCAGAAGGCTCTCTCCCATTCAGTCTGGTTGCTGCAAGCCCCCAACAGAGTGCGGCTATGTGTATCAGAACGAGACGGTGTGGAACCCAGGAGGAGGACTGGCTGGGACCGACCCAGACTGCACAAGGTGGAGCAATGACCAAAACCTGCTTTGCTATTCCTGTGACTCTTGCAAGGCTGGTGTGCTGGCTAGCCTCAGGAAGAGCTGGAGGAAGGTCTCTGTCATCAACATTGTTGTCATGATCATCCTTGTCATTGTCTACGTCATTGCTTATGCAGCTTATAGGAACAACCGCAAGATGGACAACGATGAGCCCTATGGTGAGGCAAGGATGACTAAGGCACAACCTAGTAGAATTCACCTCTAG 864 0.5266 MRTTNHLIGLLNFLTFLLSVPILGGGIWLSSRANNTDCLQFLQWPLIIIGVAIMVISLAGFAGACYRNTFLMRLYLVVMFFIIAVLIGFIVFAYVVTDKGSGRVVPNRAYLDYYLQDYSGWLEERVASDSYWGKISSCIRDSKVCSKLGRSTTLGGVPETADMFYRRRLSPIQSGCCKPPTECGYVYQNETVWNPGGGLAGTDPDCTRWSNDQNLLCYSCDSCKAGVLASLRKSWRKVSVINIVVMIILVIVYVIAYAAYRNNRKMDNDEPYGEARMTKAQPSRIHL* 288
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod10g1646 287 PANTHER TETRASPANIN-3-LIKE 1 281 - -
Dod10g1646 287 PANTHER TETRASPANIN-8-RELATED 1 281 IPR044991 GO:0009734|GO:0016021
Dod10g1646 287 PRINTS Transmembrane four family signature 66 94 - -
Dod10g1646 287 PRINTS Transmembrane four family signature 6 29 - -
Dod10g1646 287 PRINTS Transmembrane four family signature 39 65 - -
Dod10g1646 287 Pfam Tetraspanin family 6 255 IPR018499 GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod10g1646 Dod-Chr10 37424682 37430307 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod10g1646 1 279 Miscellaneous Gene Families AT5G60220 73.477 1.84e-132 377
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod10g1646 - - gmx:100798336 481.87
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod10g1646 10 37424682 37430307 Dod10g1646 10 37424682 37430307 ECH
Dod10g1646 10 37424682 37430307 Dod03g2840 03 60275266 60287312 PCT