Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod10g1641 ATGGACTTGGTATCAAGTTGCAAGGAAAAATTGAATTGTTTTCGCATAAAAGAGCTCAAAGATGTGCTCACTCAGTTAGGATTATCGAAGCAGGGAAAGAAGCAGGATCTTGTTGATAGGATATTGTCTATTCTCTCAGATGAACAAGTTTCCAAAATGTGGGCTAAGAAGAATGCTGTTGGAAAAGAACAGGTGGCAAAATTAGTGGATGACACATATAGAAAATTGCAGGGATCAGGGGCCACTGATCTAGCATCAAAGGGACAGGGTGCCTCAGATAGTAGTAATGTGAAAATTAAAGGTGAAGTTGATGAATCCTTTCAGGAAGAGACAAAGATTCGCTGTCTCTGTGGTAGTTCATTGGAAACTGAGGCACTGATAAAGTGTGAAGATCCAGGATGCCATGTGTGGCAGCACATTAACTGTGTTATTATTCCAGAGAAACCTGTGGAAGCAATCCCACCAGTTCCTGATAAATTTTACTGTGAAATTTGTCGACTCAGTCGTGCAGACCCGTTTTGGGTTTCAGTGAACAACCCTTTGTTTCCTGTGAAGTTGACTACAACCCATATTCCAACTGATGGAACCAACCCAGTCCAGAGTGTGGAAAAAACATTTCAACTTACAAGACCTGACAAGGACATGGTATCAAGACCAGAATTTGATGTTCAGGCCTGGTGTATGCTTCTGAACGACAAAGTTTCATTTAGGATGCAATGGCCTCAGTATACAGACCTACAGGTCAATGGTGTTCCTGTTCGTGCAATTAATAGACCTGGTTCACAATTGCTTGGGGCTAGTGGTCGGGATGATGGCCCAATTATCACGCCATATACAAAAGACGGAATTAATAAGATTTCCTTAACAGGGTGTGATGCTCGCATTTTCTGTTTAGGGGTCCGCATTGTTAGAAGACGCAGCATGCAACAGATCCTTAACATGATTCCAAGGGAGTCTGATGGTGAGCGTTTTGAAGATGCTCTTGCACGTGTATGTAGTTGTGTTGGGGGTGGAAATGCAAATGATGATGCAGACAGTGACAGTGATTTGGAAGTGGTTTCGGATACTTTTACAATCAACCTTCGTTGTCCAATGAGTGGTTCAAGAATGAAGATTGCAGGAAGATTCAAACCTTGCATTCACATGGGTTGTTTTGATCTTGAAATTTTTGTCGAAATGAATCAACGTTCAAGGAAGTGGCAGTGTCCCATTTGTCTTAAAAACTACGCACTGGAGAATATCATTATCGACCCTTATTTTAATCGCATAACTTCTATGATGAGAAATTGTGGAGAAGATATTACTGAGATTGAGGTGAAGCCTGATGGTTATTGGCGTGTCAAGGCTAAGAGTGAAAGTGAATGCCGGGAGTTGGGGAATCTTGCTCAATGGCACTGTTCTGATGGATCCCTATCTGTTTCTGCCGATGAAGAAGTCAACAGAGTGGAAACTTTGAAGATCAAACAGGAGGATTTTTCAGACATTCCATCTGGGTTAAGAATTGGCATCAGGAAGAATCATAATGGAGTTTGGGAAGTCAGCAAACCTGAGGACACAAATACCTCTTCTGGTAATAGATTGAGCAAGGATTTCGGAAATCACAACCACGTGATTATACCAATGAGCAGCAGTGCCACTGGAAGTGGCCGGGATGGTGATGATCCTAGCGTAAATCAGGCTGTTGATGGCCATATTGATTATTCTACTGCCAACGGGATTGAGATGGATTCTCTGTGTCACAATGACGGTGATTTGGTTTATGGATATACTGTGCCTAGCTCCTCTGCTCTGGCACCTGATGCAGAAGTTATTATTCTTAGTGATTCAGAAGAAGATAATAATGTGTTGGTATCCCCTACAATTGGGTACAATAATAATCAAAGTGGTACTGCAGATGTTTATTCGGTGCCACCGCCTGGAATTATTGATTCATATACAGAAAATCACAATCTTGGTGGAAACTCGTGCTTGGGTCTTTTTAATAACCCCAATGAAGATGATTTTGGGATGCCCTCCTCCATTTGGTCATTGCCTTCTGGAACTCAAGCAGGTTCAGGATTCCAATTGTTCAGTTCTGATGTGGATGTGTCAAATGCATTGGTCCATTTGCAGAATGCTGATATTAATTGCTCTTCATCACTGAATGGTTATACGCTGGCTCCGGATATGGGTTTGGGAACTAGTACTCCTATACCAGATTCCTCTGCGGGTCAGTCTGATGCTGATTTAAATGGTGGATTGGTTGACAATCCTTTGGCATTTGCTGGAAAAGATTCCTCACTTCAGATTTTTCTCCCAACAAGCCCTCTGGAATCATCTATGCAGCATGAAGTGAGAGAACAGGTAGATGTGTCAAATGGTGTCTGCACTGATGATTGGATATCTCTTAGGCTTGGTGGTGGTGCTGGTGGTAGTAATGATGATGGTTCTGTTCAAAATGGGTTGAATTCCGGACCACAAACTACATCCAGAGGAGATGCTACAAATACTTTGACTGATACTGGTCTGTTACTTTCTGGCCTAAATCTTCTGTGTTTTTTGGTTGAAACTACTCTTGTAAACTCTTTCATTATATGGCAATCTGCCAGAGTATGTTAG 2598 0.4196 MDLVSSCKEKLNCFRIKELKDVLTQLGLSKQGKKQDLVDRILSILSDEQVSKMWAKKNAVGKEQVAKLVDDTYRKLQGSGATDLASKGQGASDSSNVKIKGEVDESFQEETKIRCLCGSSLETEALIKCEDPGCHVWQHINCVIIPEKPVEAIPPVPDKFYCEICRLSRADPFWVSVNNPLFPVKLTTTHIPTDGTNPVQSVEKTFQLTRPDKDMVSRPEFDVQAWCMLLNDKVSFRMQWPQYTDLQVNGVPVRAINRPGSQLLGASGRDDGPIITPYTKDGINKISLTGCDARIFCLGVRIVRRRSMQQILNMIPRESDGERFEDALARVCSCVGGGNANDDADSDSDLEVVSDTFTINLRCPMSGSRMKIAGRFKPCIHMGCFDLEIFVEMNQRSRKWQCPICLKNYALENIIIDPYFNRITSMMRNCGEDITEIEVKPDGYWRVKAKSESECRELGNLAQWHCSDGSLSVSADEEVNRVETLKIKQEDFSDIPSGLRIGIRKNHNGVWEVSKPEDTNTSSGNRLSKDFGNHNHVIIPMSSSATGSGRDGDDPSVNQAVDGHIDYSTANGIEMDSLCHNDGDLVYGYTVPSSSALAPDAEVIILSDSEEDNNVLVSPTIGYNNNQSGTADVYSVPPPGIIDSYTENHNLGGNSCLGLFNNPNEDDFGMPSSIWSLPSGTQAGSGFQLFSSDVDVSNALVHLQNADINCSSSLNGYTLAPDMGLGTSTPIPDSSAGQSDADLNGGLVDNPLAFAGKDSSLQIFLPTSPLESSMQHEVREQVDVSNGVCTDDWISLRLGGGAGGSNDDGSVQNGLNSGPQTTSRGDATNTLTDTGLLLSGLNLLCFLVETTLVNSFIIWQSARVC* 866
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod10g1641 865 CDD PHD_Bye1p_SIZ1_like 114 165 - -
Dod10g1641 865 ProSitePatterns Zinc finger PHD-type signature. 115 165 IPR019786 -
Dod10g1641 865 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 103 171 IPR013083 -
Dod10g1641 865 PANTHER E3 SUMO-PROTEIN LIGASE SIZ1 9 814 - -
Dod10g1641 865 SUPERFAMILY FYVE/PHD zinc finger 107 169 IPR011011 -
Dod10g1641 865 ProSiteProfiles SAP motif profile. 11 45 IPR003034 -
Dod10g1641 865 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 337 447 IPR013083 -
Dod10g1641 865 MobiDBLite consensus disorder prediction 806 827 - -
Dod10g1641 865 SMART sap_9 11 45 IPR003034 -
Dod10g1641 865 SMART PHD_3 114 166 IPR001965 -
Dod10g1641 865 Pfam MIZ/SP-RING zinc finger 359 407 IPR004181 GO:0008270
Dod10g1641 865 MobiDBLite consensus disorder prediction 512 533 - -
Dod10g1641 865 Pfam SAP domain 15 42 IPR003034 -
Dod10g1641 865 MobiDBLite consensus disorder prediction 513 530 - -
Dod10g1641 865 MobiDBLite consensus disorder prediction 804 827 - -
Dod10g1641 865 SUPERFAMILY SAP domain 1 64 IPR036361 -
Dod10g1641 865 Gene3D SAP domain 1 62 IPR036361 -
Dod10g1641 865 PANTHER ZINC FINGER MIZ DOMAIN-CONTAINING PROTEIN 9 814 - -
Dod10g1641 865 ProSiteProfiles Zinc finger SP-RING-type profile. 346 429 IPR004181 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod10g1641 Dod-Chr10 37328199 37338499 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod10g1641 - - gmx:100793735 1300.8
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod10g1641 10 37328199 37338499 Dod10g1641 10 37328199 37338499 ECH
Dod10g1641 10 37328199 37338499 Dod03g2824 03 60116270 60125620 PCT