Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod10g1612 ATGAGTGAGATCAATTCCCAATCCAATTCTTCGAGCTCCTGTAGCTCGGATCACGACCCTGACCCTCCCATCAAGCTCCAACTGCCTCCACTCTCGTACAGCCTCTTCGACGCAGAACCCTCGGAGCCAAACGGTGTCGTTCACGGATCTGATTCTGCTCAACCTCAACCCTCCCGCTCCCACGAGATTGAAATTCGCGGCTCATCCGAACCCCCGAGCCCTAGCAGCAGCGGTTACGCCGGCGAAAGGGGAAGCAGCGCCGCCACCAGCGTCTCCGCCGCCGAAGACCTCCCTCACCACGAAATTCAGGAGTTGAGCATCCACGATACCACCCTCCCTCCTCCCTCTTCTCCCGAAAAACGACACGCCGATGAGGATGATGCTTCCATTTCATGGAGGAAAAGGAAGAAGCATTTTTTTGTTCTCAGTCATTCTGGTAAACCAATATATTCTAGGTATGGAGACGAACACAAGCTTGCTGGGTTTTCAGCAACTTTGCAAGCAATCATTTCCTTTGTGGAGAATGGGTATTGTGGCCATCTCTGTTGTGGGCCAATTTACTTAGTCTGCATCAGCTGCACAGAAGAGCCTTATGAATCATTAAAGGGACAGTTAGAGTTTATTTATGGCCAGATGATTGTTATACTAACAAAGTCAGTAAACAGATGCTTTGAGAAGAATCCAAAGTTTGATATGACACCTTTGCTTGGTGGAACAGACATTGTGTTCTCTTCGCTAATCCACTCTTTTAGCTGGAATCCAGCTACATTTCTTCATGCCTATACTTGTCTGCCTCTGGCATATGCAACAAGGCAAGCTGCTGGTGCTATCTTGCAGGATGTTGCGGATTCAGGTGTTCTGTTTGCAATACTGCTGTGCAGGCATAAGGTAATCAGTCTAGTTGGTGCCCAGAAAGCCACCCTCCATCCAGATGATATGCTGCTGCTGGCCAACTTTGTAATGTCATCAGAATCCTTCAGGCAAGTTGAACTGGCTATATTGACATCTGAAGCATTTTCTCCTGTTTGCTTGCCAAGATACAATCCTTTGGCGTTTTTGTATGCTTATATCCATTATTTTGACGATGACACATACTTGATGTTGCTGACCACTAGTTCAGATGCATTTTACCATCTTAAGGATTGCAGGATTCGTATTGAATCGGTCCTTTTAAAGTCAAATGTCCTTGGTGAAGTTCAGAGATCCTTGCTAGATGGTGGAATGCATGTTGAGGATTTGCCACCCTTACCTCGTGCTGGATCATCATCTCATTTAGGCCAGCCCAGCCTTCCATCAGATTCTCCTGAAAGATTGAGGGAACCTAGTTCTGGCACTGGTGGTGCTGCTGGGTTGTGGCATTTCATATATCGCAGTATATATCTGGATCAATATGTATCTTCAGAGTTCTCATCTCCGATTAGCACTCCTCGGCAGCAGAAAAGATTGTATAGAGCTTACCAGAAACTGTTTGCTTCCATGCACGATAAAGGAATTGGGCCTCACAAAACGCAGTTTAGGAGGGATGAAAACTACGTCCTTCTCTGTTGGGTAACACAGGATTTCGAGCTTTATGCTGCATTTGATCCTCTTGCAGACAAGATAGAGTTTGTGTAA 1614 0.4634 MSEINSQSNSSSSCSSDHDPDPPIKLQLPPLSYSLFDAEPSEPNGVVHGSDSAQPQPSRSHEIEIRGSSEPPSPSSSGYAGERGSSAATSVSAAEDLPHHEIQELSIHDTTLPPPSSPEKRHADEDDASISWRKRKKHFFVLSHSGKPIYSRYGDEHKLAGFSATLQAIISFVENGYCGHLCCGPIYLVCISCTEEPYESLKGQLEFIYGQMIVILTKSVNRCFEKNPKFDMTPLLGGTDIVFSSLIHSFSWNPATFLHAYTCLPLAYATRQAAGAILQDVADSGVLFAILLCRHKVISLVGAQKATLHPDDMLLLANFVMSSESFRQVELAILTSEAFSPVCLPRYNPLAFLYAYIHYFDDDTYLMLLTTSSDAFYHLKDCRIRIESVLLKSNVLGEVQRSLLDGGMHVEDLPPLPRAGSSSHLGQPSLPSDSPERLREPSSGTGGAAGLWHFIYRSIYLDQYVSSEFSSPISTPRQQKRLYRAYQKLFASMHDKGIGPHKTQFRRDENYVLLCWVTQDFELYAAFDPLADKIEFV* 538
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod10g1612 537 PANTHER BNAC04G15860D PROTEIN 58 534 - -
Dod10g1612 537 Pfam First Longin domain of FUZ, MON1 and HPS1 137 245 IPR043972 GO:0016192
Dod10g1612 537 MobiDBLite consensus disorder prediction 69 92 - -
Dod10g1612 537 PRINTS Saccharomyces cerevisiae 73.5kDa hypothetical protein signature 155 175 IPR004353 GO:0006623
Dod10g1612 537 PRINTS Saccharomyces cerevisiae 73.5kDa hypothetical protein signature 137 154 IPR004353 GO:0006623
Dod10g1612 537 PRINTS Saccharomyces cerevisiae 73.5kDa hypothetical protein signature 281 294 IPR004353 GO:0006623
Dod10g1612 537 PRINTS Saccharomyces cerevisiae 73.5kDa hypothetical protein signature 365 391 IPR004353 GO:0006623
Dod10g1612 537 PRINTS Saccharomyces cerevisiae 73.5kDa hypothetical protein signature 337 360 IPR004353 GO:0006623
Dod10g1612 537 PRINTS Saccharomyces cerevisiae 73.5kDa hypothetical protein signature 513 527 IPR004353 GO:0006623
Dod10g1612 537 PANTHER SAND PROTEIN-RELATED 58 534 IPR004353 GO:0006623
Dod10g1612 537 MobiDBLite consensus disorder prediction 1 128 - -
Dod10g1612 537 MobiDBLite consensus disorder prediction 47 62 - -
Dod10g1612 537 Pfam Third Longin domain of FUZ, MON1 and HPS1 450 533 IPR043970 GO:0016192
Dod10g1612 537 MobiDBLite consensus disorder prediction 417 445 - -
Dod10g1612 537 MobiDBLite consensus disorder prediction 1 18 - -
Dod10g1612 537 Pfam Second Longin domain of FUZ, MON1 and HPS1 286 384 IPR043971 GO:0016192
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod10g1612 Dod-Chr10 37070718 37076391 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod10g1612 K20195 - gmx:100816794 835.484
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod10g1612 10 37070718 37076391 Dod10g1612 10 37070718 37076391 ECH
Dod10g1612 10 37070718 37076391 Dod03g2794 03 59816634 59821289 PCT