Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod10g1600 ATGGAGAGAGAACAAGAGATGATGAAGCAATCCAAATTCAAGAGGATTTGTGTGTTCTGTGGTAGCAGCCCCGGCAACAAAGCTAGCTACAAAGATGCTGCCATTGAGCTTGGAAGAGAATTGGTGTCAAGAAATATTGATCTGGTTTATGGAGGAGGCAGCATTGGTTTGATGGGGTTGATTTCTCAGGCTGTATTTGATGGAGGTCGCCATGTAATTGGAGTTATTCCCAAGACGCTTATGCCAAGAGAGCTTACTGGAGAGACAGTGGGGGAAGTGAAGGCAGTAGCAGACATGCATCAAAGGAAAGCCGAGATGGCTAAACATTCTGATGCCTTCATTGCCTTACCCGGTGGGTATGGGACACTTGAGGAGCTCCTTGAGGTGATAACCTGGGCTCAACTTGGCATCCATGATAAACCGGTGGGATTGCTGAATGTTGATGGATACTACAATTCCTTCTTGACTTTCATTGACAAAGCCGTGGAGGAAGGCTTCATCAGCCCCACAGCTCGCCACATAATTGTGTCCGCCCCAACACCAAAAGAGCTTGTCAAAAAGATGGAGGAATATTTCCCACAACATGAAAGAGTTGCCTCTAAGCTAAGCTGGGAAAGTGAAATGTGA 627 0.4641 MEREQEMMKQSKFKRICVFCGSSPGNKASYKDAAIELGRELVSRNIDLVYGGGSIGLMGLISQAVFDGGRHVIGVIPKTLMPRELTGETVGEVKAVADMHQRKAEMAKHSDAFIALPGGYGTLEELLEVITWAQLGIHDKPVGLLNVDGYYNSFLTFIDKAVEEGFISPTARHIIVSAPTPKELVKKMEEYFPQHERVASKLSWESEM* 209
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod10g1600 208 TIGRFAM TIGR00730: TIGR00730 family protein 14 191 IPR005269 GO:0009691|GO:0016787
Dod10g1600 208 PANTHER LOG FAMILY PROTEIN YJL055W 1 207 - -
Dod10g1600 208 PANTHER CYTOKININ RIBOSIDE 5'-MONOPHOSPHATE PHOSPHORIBOHYDROLASE 1 207 - -
Dod10g1600 208 SUPERFAMILY MCP/YpsA-like 12 191 - -
Dod10g1600 208 Pfam Possible lysine decarboxylase 58 188 IPR031100 -
Dod10g1600 208 Gene3D - 2 190 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod10g1600 Dod-Chr10 36930764 36936632 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod10g1600 K22522 - gmx:100811156 385.185
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod10g1600 10 36930764 36936632 Dod10g1600 10 36930764 36936632 ECH
Dod10g1600 10 36930764 36936632 Dod03g2779 03 59601432 59606185 ECH
Dod10g1600 10 36930764 36936632 Dod03g2779 03 59601432 59606185 PCT