Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod10g1583 ATGGCCAACTTAAGTGTCAGAAACTGCAGCAGTAGCAAAAACAAGGGTAGGTGGGTTGGCCTTGTGAAGCTCAAGTTTGTGGTTGAGAAGCTCCAAAAGAGCCTCTTAATGGTGAGGAGTAATAACAAATCAAGCTCCAACTATGACGAATATGATGAAGGGTGTAACTCAAAATATGTGCCAGATGATGTGAAGGAAGGGCATTTTGGTGTGATTGCTGATGATGAGGGTGGGAAGGAACCAAAGAGGTTTGTGATGCCACTGAGCAGTTTGACAAACCCAACATTTTTGATGCTGTTGGAGCAAGCAAAAGAAGAGTATGGTTTTTATCATAAAGGTGCACTCACTATTCCTTGCAGGCCTAGTGTGCTTGAGAGGATACTGGTGGAGCAGCAATGGCAGCAAGATCAGGACGGAGTCTCTGAAAGCTGGAATTCAGATCAGCACTGCTTGGCGTGCTTACTAGGATCTTCAACTTTTACTTGTGTTCCTCCAGCAAAGGTGCACTTTTCTGGTCCATCTATTGTCACCCAAATGATTAAAAGGTGTTATGATATTAGGGGAACCGTGTTGCTCCTCCAGAGTTGTGATATGATAGCTACAGGTTCTTACACCTGGCCTGACTTCACGCTATGCAACTCTTTTGGCTTCAGGGGCGGATTTACTTAG 669 0.4469 MANLSVRNCSSSKNKGRWVGLVKLKFVVEKLQKSLLMVRSNNKSSSNYDEYDEGCNSKYVPDDVKEGHFGVIADDEGGKEPKRFVMPLSSLTNPTFLMLLEQAKEEYGFYHKGALTIPCRPSVLERILVEQQWQQDQDGVSESWNSDQHCLACLLGSSTFTCVPPAKVHFSGPSIVTQMIKRCYDIRGTVLLLQSCDMIATGSYTWPDFTLCNSFGFRGGFT* 223
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod10g1583 222 Pfam Auxin responsive protein 45 128 IPR003676 GO:0009733
Dod10g1583 222 PANTHER AUXIN-RESPONSIVE PROTEIN SAUR32-LIKE 27 136 - -
Dod10g1583 222 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 27 136 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod10g1583 Dod-Chr10 36590393 36592261 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod10g1583 55 128 Calmodulin-binding Proteins AT3G43120 43.243 3.40e-13 63.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod10g1583 - K14488 gmx:102668167 152.14
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod10g1583 10 36590393 36592261 Dod10g1583 10 36590393 36592261 ECH
Dod10g1583 10 36590393 36592261 Dod03g2744 03 59133198 59133614 PCT