Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod10g1575 ATGGCATCATCAGCATCATCCTCAAGATTCCTCAAAAAACTGTCCCTGTCTCCTCTTATGTTGTTCTTGCTCCTCAACACCCTCTTCTTCATTTCACCTTCATTCTCCTCTCCAACGTACCCAACAAGCAATGACCTTCGCTTCTCTTCATTGGCCTCCCTCCCAAAACTGCATGCAGAGAAGCTCATAAGAGGGCTTCACCTCTTCCCAAAAGGCTCCATTAACACAGTAGAGAGTGACCCTCATCTTGTCCCTGGAGGAAACATCGTGGAGAAGAGGTTCACTTTCCCTAATCTTGGTGATTCTTCTTCTGAGCCTTCTGTTCAAGACCTTGGTCACCATGCAGGCTACTACCGCCTTCCTCGTTCCAAAGCTGCAAGGATGTTCTACTTTTTCTTCGAATCTCGCAGCAGTAAGGATGACCCGGTTGTCATATGGTTGACTGGAGGACCAGGGTGCAGCAGTGAGTTAGCTTTATTTTATGAGAATGGTCCTTTTCAATTCACAAAGAACTTGTCTCTTGCATGGAATGATTATGGCTGGGATAAGGCATCAAATATTCTTTTTGTAGACCAACCCACTGGGACAGGTTTTAGCTATACTTCTGATGAGAGTGACATTCGCCATGATGAAGTGGGCGTTAGCAATGATCTGTATGACTTCTTGCAGGAATTTTTCAAGGAGCACCCTCAGTTTGTTAAGAACAATTTCTACATTACTGGAGAGTCATATGCTGGACACTACATTCCAGCTCTTGCATCAAGGGTTCACCAAGGAAACAAAGCAAAAGAAGGAATTCATATAAATCTCAAGGGTTTTGCTATTGGAAATGGGTTAACTAATCCTGAAATTCAGTACCAGGCATACACAGATTATGCATTAGACAGGGGACTTATTAAAAAGGCTGATTATGAGAGTATCAACAAGTTGCTCCCACCATGTGAGAAGGCCATAAAAGCTTGCGGCACTGAAGGTGGAGAAGCATGTGTGACTTCGTTATATGTTTGCAATAACATATTCAATCGGATATTGTCCATCGCTGGAAACATTAACTATTATGACATCAGAAAGGAATGTGAGGGAGATCTGTGTTATGACTTCTCCAATGTAGAAACATTCTTGAACATGAAGACAGTGAGGGATGCTTTAGGTGTTGGGGACTTGGACTTTGTTTCATGCAGTAGCACAGTATATAATGCAATGATGCAGGACTGGATGAGAAATCTAGAGGTGGGAATTCCTGCTCTTCTTGAGGATGGAATCAAGGTGCTTGTGTATGCTGGAGAAGAAGATCTTATATGCAATTGGCTAGGGAACTCAAGGTGGGTTCATGCAATGGAGTGGTCAGGTCAAAAAGAGTTTGGAGCATCTCCTTCAGTCCCATTTTTGGTAGATGGTGCGGAAGCAGGAATGTTGAAAACCCATGGACCTCTTGCTTTCCTTAAGGTGAATGAGGCTGGCCACATGGTCCCTATGGATCAACCAAAAGCTGCACTTCAGATGCTAAGAAGCTGGATGCAAGGGAAACTGACCATGACAAAGAGTGGAGCTAATGTCTCTCCTAAGTGA 1569 0.4366 MASSASSSRFLKKLSLSPLMLFLLLNTLFFISPSFSSPTYPTSNDLRFSSLASLPKLHAEKLIRGLHLFPKGSINTVESDPHLVPGGNIVEKRFTFPNLGDSSSEPSVQDLGHHAGYYRLPRSKAARMFYFFFESRSSKDDPVVIWLTGGPGCSSELALFYENGPFQFTKNLSLAWNDYGWDKASNILFVDQPTGTGFSYTSDESDIRHDEVGVSNDLYDFLQEFFKEHPQFVKNNFYITGESYAGHYIPALASRVHQGNKAKEGIHINLKGFAIGNGLTNPEIQYQAYTDYALDRGLIKKADYESINKLLPPCEKAIKACGTEGGEACVTSLYVCNNIFNRILSIAGNINYYDIRKECEGDLCYDFSNVETFLNMKTVRDALGVGDLDFVSCSSTVYNAMMQDWMRNLEVGIPALLEDGIKVLVYAGEEDLICNWLGNSRWVHAMEWSGQKEFGASPSVPFLVDGAEAGMLKTHGPLAFLKVNEAGHMVPMDQPKAALQMLRSWMQGKLTMTKSGANVSPK* 523
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod10g1575 522 Gene3D alpha/beta hydrolase 98 519 IPR029058 -
Dod10g1575 522 PANTHER SERINE CARBOXYPEPTIDASE 3 46 511 - -
Dod10g1575 522 Pfam Serine carboxypeptidase 110 508 IPR001563 GO:0004185|GO:0006508
Dod10g1575 522 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 46 511 IPR001563 GO:0004185|GO:0006508
Dod10g1575 522 PRINTS Carboxypeptidase C serine protease (S10) family signature 190 200 IPR001563 GO:0004185|GO:0006508
Dod10g1575 522 PRINTS Carboxypeptidase C serine protease (S10) family signature 225 250 IPR001563 GO:0004185|GO:0006508
Dod10g1575 522 PRINTS Carboxypeptidase C serine protease (S10) family signature 478 491 IPR001563 GO:0004185|GO:0006508
Dod10g1575 522 PRINTS Carboxypeptidase C serine protease (S10) family signature 177 189 IPR001563 GO:0004185|GO:0006508
Dod10g1575 522 ProSitePatterns Serine carboxypeptidases, serine active site. 239 246 IPR018202 GO:0004185
Dod10g1575 522 SUPERFAMILY alpha/beta-Hydrolases 111 509 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod10g1575 Dod-Chr10 36474475 36477999 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod10g1575 K16298 - gmx:100785987 863.988
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod10g1575 10 36474475 36477999 Dod10g1575 10 36474475 36477999 ECH
Dod10g1575 10 36474475 36477999 Dod03g2735 03 59045397 59050139 PCT
Dod03g2734 03 58999717 59004606 Dod10g1575 10 36474475 36477999 PCT