Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod10g1533 ATGGCTTCTTCGAGAGTGGATCTAGATGGGAACCCCATTAAGCCGATCACGATTTGCATGATCGGAGCAGGAGGGTTCATAGGGTCGCACCTCTGCGAGAAGCTGATGAACGAGACACCGCACACGGTGCTAGCTCTTGATGTCTACAACGACAAGATCAAGCACCTCTTGGAGCCAGACACGAACCCATGGAACGGTCGCATCCAGTTCCACCGCCTCAACATCAAGAACGATTCAAGGCTCGAGGGTCTCATCAAAATGGCAGATCTGACTATTAATTTGGCTGCTATATGCACTCCTGCGGATTACAACACTCGCCCTTTGGACACCATTTACAGCAATTTCATTGATGCACTTCCGGTGGTAAAGTACTGTTCGGAAAACAACAAGCGTCTCATTCATTTCTCAACTTGTGAGGTGTATGGGAAGACCATTGGGAGCTTTCTCCCCAAGGATAGCCCTCTTCGTAAGGATCCTGCATACTATGTTCTTAAAGAAGACGAGTCTCCATGCATTTTTGGTTCAATTGAGAAGCAGAGATGGTCTTATGCCTGTGCAAAGCAGTTGATTGAGAGGCTGATTTATGCTGAGGGTGCTGAAAACGGCTTGGAGTTCACAATTGTGAGACCCTTTAATTGGATTGGACCAAGAATGGACTTCATTCCTGGCATTGATGGTCCAAGTGAGGGTGTTCCTCGTGTTCTGGCATGCTTTAGTAATAATCTCCTCCGGAGAGAGCCCCTCAAGCTTGTGGATGGGGGCCAATCCCAGAGGACTTTTGTTTATATTAAGGATGCCATTGAAGCCGTCCTATTGATGATTGAAAATCCTGCTAGGGCCAATGGGCAGATTTTTAATGTGGGTAACCCAAACAATGAGGTTACAGTTAGGCAGCTTGCTGAGATGATGACTGAGGTTTACACCAAGGTAAGCGGAGAATCACCTTTGGAAACTCCTACCATTGATGTCAGCTCCAAAGAATTTTATGGTGAGGGATATGATGATAGTGACAAGAGAATCCCTGACATGACCATTATTAACAGGCAGCTTGGCTGGAATCCTAAGACATCACTTTGGGACCTGCTTGAATCAACTCTCACCTATCAGCACAGGACTTATGCTGAAGCCATCAAGAAAGTCATTGCCAAGCCTGTGGCTAGTTAA 1164 0.4648 MASSRVDLDGNPIKPITICMIGAGGFIGSHLCEKLMNETPHTVLALDVYNDKIKHLLEPDTNPWNGRIQFHRLNIKNDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFSTCEVYGKTIGSFLPKDSPLRKDPAYYVLKEDESPCIFGSIEKQRWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRREPLKLVDGGQSQRTFVYIKDAIEAVLLMIENPARANGQIFNVGNPNNEVTVRQLAEMMTEVYTKVSGESPLETPTIDVSSKEFYGEGYDDSDKRIPDMTIINRQLGWNPKTSLWDLLESTLTYQHRTYAEAIKKVIAKPVAS* 388
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod10g1533 387 Pfam NAD dependent epimerase/dehydratase family 18 288 IPR001509 -
Dod10g1533 387 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 17 370 IPR036291 -
Dod10g1533 387 Gene3D - 16 378 - -
Dod10g1533 387 PANTHER - 4 386 - -
Dod10g1533 387 PANTHER BIFUNCTIONAL POLYMYXIN RESISTANCE PROTEIN ARNA 4 386 - -
Dod10g1533 387 CDD Arna_like_SDR_e 17 372 IPR045869 GO:0016831
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod10g1533 Dod-Chr10 36055329 36059569 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod10g1533 16 382 Miscellaneous Gene Families AT1G02000 20.823 1.95e-07 50.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod10g1533 K12449 - gmx:100792879 760.755
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod10g1533 10 36055329 36059569 Dod10g1533 10 36055329 36059569 ECH
Dod10g1533 10 36055329 36059569 Dod03g2432 03 55747349 55751786 PCT