Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod10g1513 ATGGGTGAATTCAAGCACTTTGTGATTGTTAAGTTCAAGGAAGGTGTTGCAGTTGAAGAGATAACCAAAGGGTTGGAGAAGTTGGTCTCTGAGATTGATGCTGTCAAGTCCTTTGAATGGGGACAGGACACTGAAAGCCTGGATGTGCTGAGACAAGATTTCACTCATGCCTTCTTGATGACATTCAGCAAGAAAGAAGACTTCACTGCTTTTCAGAGCCACCCTAATCATGTCGAGTTCTCGACAACATTTTCAGCAGCTATTGAGAAGATTGTGGTGCTGGATTTCCCATCTACTCCTGTCAAGGCACCAGCATGA 318 0.4434 MGEFKHFVIVKFKEGVAVEEITKGLEKLVSEIDAVKSFEWGQDTESLDVLRQDFTHAFLMTFSKKEDFTAFQSHPNHVEFSTTFSAAIEKIVVLDFPSTPVKAPA* 106
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod10g1513 105 Pfam Stress responsive A/B Barrel Domain 5 97 IPR013097 -
Dod10g1513 105 SMART Dabb_2 4 98 IPR013097 -
Dod10g1513 105 PANTHER EXPRESSED PROTEIN 1 104 - -
Dod10g1513 105 SUPERFAMILY Dimeric alpha+beta barrel 2 100 IPR011008 -
Dod10g1513 105 ProSiteProfiles Stress-response A/B barrel domain profile. 4 96 IPR013097 -
Dod10g1513 105 Gene3D - 2 104 - -
Dod10g1513 105 PANTHER - 1 104 IPR044662 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod10g1513 Dod-Chr10 35739774 35741236 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod10g1513 - - pvu:PHAVU_005G126400g 190.66
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod10g1513 10 35739774 35741236 Dod10g1513 10 35739774 35741236 ECH
Dod10g1513 10 35739774 35741236 Dod03g2410 03 55363309 55364535 PCT