Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod10g1497 ATGGAGGTTGGAAGTGTACTCGACTTTCTTCAGGACAAGACCATCTTAGTTATTGGAGCCACCGGCTTTATAGCCAAAATTTTTGTGGAGAAGGTATTGAGGGTTCAACCAAATGTTAAGAAGCTTTATCTTCTCTTAAGAGCCGCAGATACCAAATCTGCCACTCACCGCTTGCACCATGAGATCATAGGGAAGGACCTGTTTAATTTGCTGAAGGAAAACTTGGGTGCAAATTTCAAGTCCTTTATATCGGAAAAGTTGACTCTGGTGCCTGGAGACATTTCTTGTGAGGACTTGGGTTTGAATGATTCCATTCTGCGGGAAGAGATTCTCAATCAAGTAGATGTTATCGTTAATTTGGCTGCAACCACAAACTTCGATGAAAGATATGACATAGCGTTGGATCTAAATGCCTTTGGAGTCAAGCATGTCATAAGCTTCGCTAAACAATGTAGTAAACTCAAAGTGCTCGTCCACGTATCAACAGCTTATGTATGTGGTGAGAGAGGTGGACTCATATTAGAGAACCCATATCACTTGGGCGATTCACTGAATGGAGTGCGTGGATTAGACATCAATGCAGAAAAGAAAATAGTGCGCGACAAATTGGTTGAGCTACAGGATCAGGGAGCCACAGAATATGAAATTAAACTGGCCATGAAGGACCTAGGCATTACCAGGGCAAAAGTATATGGATGGCCAAATCCATACGTATTTACGAAGGCAATAGGAGAGATGCTTGTGGAACATTTGAAAGGAAGCCTATCCACTGTTATTTTGCGTCCGACGATCGTTACAAGTACATTCAAAGAACCTTTCCCCGGTTGGGCTGAAGGTGTAAGAACCATTGACAGTTTAGCTGTTGCTTATGGGAAAGGAAAATTAACATGCTTCCTTGGAGACATCAATGGAGTTGTCGATTTGATACCAGCTGACATGTTGGTGAATGCAATGCTAGTGGCCATCGTGGCTCATGCAAATCATCCAAGTGATATCATATATCATGTGGGTTCCTCTGTTAGAAACCCAGTTAGGTACGCCAATCTCCAAGACTACGGCTTAAGGTATTTCACTGCAAAACCATGGATAAACAAGGATGGAACAGCCGTCAAGGTTGGCAAAGTTACCGTATTCACAAACATGGCTAGCTTCCGAAGATATATGTTCCTTCACTATCTGCTTCTGTTAAAGGGGCTAGAGCTGGTCAATACCGCATTTTGCAAGTATTTTCAGGGAACATATCAAGAGCTCAACAGAAAGATTCGTACTGTGATGCGGTTGGTGGAGCTTTACAGGCCTTACTTGTTCTTCAGTGGCATATTCGATGATATGAACACGGAGAAGTTGCGAATGGCATCAAGAGAAGGAGAGACAGAGACAAATTTGTTTTACTTCGACCCAAAAGTGATTGATTGGGATGATTACTTTATGAACACTCATTTCCCCGGAATTGTCAAGTACATTTTCAAGTGA 1473 0.4229 MEVGSVLDFLQDKTILVIGATGFIAKIFVEKVLRVQPNVKKLYLLLRAADTKSATHRLHHEIIGKDLFNLLKENLGANFKSFISEKLTLVPGDISCEDLGLNDSILREEILNQVDVIVNLAATTNFDERYDIALDLNAFGVKHVISFAKQCSKLKVLVHVSTAYVCGERGGLILENPYHLGDSLNGVRGLDINAEKKIVRDKLVELQDQGATEYEIKLAMKDLGITRAKVYGWPNPYVFTKAIGEMLVEHLKGSLSTVILRPTIVTSTFKEPFPGWAEGVRTIDSLAVAYGKGKLTCFLGDINGVVDLIPADMLVNAMLVAIVAHANHPSDIIYHVGSSVRNPVRYANLQDYGLRYFTAKPWINKDGTAVKVGKVTVFTNMASFRRYMFLHYLLLLKGLELVNTAFCKYFQGTYQELNRKIRTVMRLVELYRPYLFFSGIFDDMNTEKLRMASREGETETNLFYFDPKVIDWDDYFMNTHFPGIVKYIFK* 491
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod10g1497 490 CDD FAR_C 417 489 IPR033640 -
Dod10g1497 490 CDD FAR-N_SDR_e 13 361 - -
Dod10g1497 490 PANTHER MALE STERILITY PROTEIN 2-RELATED 2 489 IPR026055 GO:0080019
Dod10g1497 490 Pfam Male sterility protein 19 318 IPR013120 -
Dod10g1497 490 Pfam Male sterility protein 392 490 IPR033640 -
Dod10g1497 490 PANTHER FATTY ACYL-COA REDUCTASE 2 489 - -
Dod10g1497 490 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 7 337 IPR036291 -
Dod10g1497 490 Gene3D - 8 376 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod10g1497 Dod-Chr10 35424547 35431640 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod10g1497 110 489 Acyl Lipid Metabolism Gene Families AT4G33790 60.630 8.78e-178 502
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod10g1497 K13356 - gmx:100805776 780.4
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod10g1497 10 35424547 35431640 Dod10g1497 10 35424547 35431640 ECH
Dod10g1497 10 35424547 35431640 Dod03g2394 03 55058870 55066381 PCT