Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod10g1481 ATGAGATCAGTAATGGCAACATGTTCCTTCTTCTTCAAAGTGCTATTGCTGCTTCTCACCATTGCTGATACTTTTGTGCAAACAAGAGGCCTTGATTTTGGAATCAACTATGGACAGATAGCCAACAATCTTCCTTCACCATCTCGCGTGGCTGTTCTTATAGATTCTCTGAATGTAAGCAGAATTAAGCTTTATGATGCCGATCCAAATGTTCTATCTGCATTCTCCAATTCCAATGTGGAATTCATTATAGGACTTGGAAATGAATACCTGCAAAGCATGAGAGACCCTTCGAAGGCTCAGAGTTGGGTTCAACAGAATGTTCAACCTTACCTTTCACAGACCAAAATCACTTGCATTACTGTTGGAAATGAGGTATTCAGCAACAATGACACTCAGCTCATGATGAACCTTCTCCCAGCAATGAAATCTGTGTATAATGCCCTTTTGAACCTTGGACTATCACAACAGGTTACTGTCACAACGGCTCATTCTTTCAACATTTTAACCAATTCTTTCCCTCCTTCATCTGGGGCATTTAGGCAAGATCTAATACAATACATACAACCCCTCCTTAACTTTCATTCTCAGATCAAATCACCCTTCCTTATTAATGCATATCCTTTTTTTGCATACAAGGACAACCCAAATCAGATTTCATTGAGTTATGTACTATTTCAGCCAAATCCTGGGAACATTGACCCAGTCACCAATTTGCATTATGATAACATGTTGTATGCTCAAATTGATGCTGTCTACACTGCCATTAAAGCGCTCGGGCATACCGATATTGAGGTCAGGATTTCAGAGACTGGTTGGCCTTCTAAGGGTGACCCAGATGAGTTTGGAGCTACACCAGAGAATGCAGAAATATATAATAGTAATTTGTTGAAGAGGATAGAGATGAAGCAAGGCACTCCTGCAAATCCATCTGTTCCAATTGATATCTTTGTCTTTGCACTTTTTAATGAGGATTTGAAGCCTGGTCCTGCATCAGAGAGGAACTATGGCCTTTATTATCCTGATGGCTCCCCAGTTTATAACATTGGATTACAAGGTTACCTCCCAGAAATGGTTATAGAATCCAAATCCAACGTTTTGTCCATCAATTTTCTCATTTACATTGTTACATGCTTGGTGTTGTGTTGGGAGCTTTCAAGATTGTGA 1167 0.3985 MRSVMATCSFFFKVLLLLLTIADTFVQTRGLDFGINYGQIANNLPSPSRVAVLIDSLNVSRIKLYDADPNVLSAFSNSNVEFIIGLGNEYLQSMRDPSKAQSWVQQNVQPYLSQTKITCITVGNEVFSNNDTQLMMNLLPAMKSVYNALLNLGLSQQVTVTTAHSFNILTNSFPPSSGAFRQDLIQYIQPLLNFHSQIKSPFLINAYPFFAYKDNPNQISLSYVLFQPNPGNIDPVTNLHYDNMLYAQIDAVYTAIKALGHTDIEVRISETGWPSKGDPDEFGATPENAEIYNSNLLKRIEMKQGTPANPSVPIDIFVFALFNEDLKPGPASERNYGLYYPDGSPVYNIGLQGYLPEMVIESKSNVLSINFLIYIVTCLVLCWELSRL* 389
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod10g1481 388 Gene3D Glycosidases 32 355 - -
Dod10g1481 388 PANTHER GLUCAN ENDO-1,3-BETA-GLUCOSIDASE 14 9 366 - -
Dod10g1481 388 Pfam Glycosyl hydrolases family 17 34 349 IPR000490 GO:0004553|GO:0005975
Dod10g1481 388 SUPERFAMILY (Trans)glycosidases 33 349 IPR017853 -
Dod10g1481 388 PANTHER GLUCAN ENDO-1,3-BETA-GLUCOSIDASE BG1-RELATED-RELATED 9 366 IPR044965 GO:0004553|GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod10g1481 Dod-Chr10 35161224 35165807 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod10g1481 83 383 Glycoside Hydrolase AT2G27500 66.887 5.28e-158 445
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod10g1481 - - gmx:100786020 696.812
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod10g1481 10 35161224 35165807 Dod10g1481 10 35161224 35165807 ECH
Dod10g1481 10 35161224 35165807 Dod03g2363 03 54560860 54565345 PCT