Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod10g1401 ATGGCGGAAACCCTAAGCCCCGACCCGACCACGGGTCAGAGACAAAGGCTTCCTTCGATGCGATCTCCGACGAGCGCTTTCTTCCTGGGCTCCAACAATGACCACCTTGAACGCGCCCAGGCACGTGCCGCCCGTGCCGCCGCCGTCCGCCGCAAGTCCCTCGCCGCGGCCAATTTGCACCACCAACACCTCGACGACGCAGGTTCCGATCACTGCCTAAACAAGCAGCAGATCCTCGTTTTGTTCCACAACTGCATAAAACTTGCCAGCGAAAACAAAATTAATCAGAAGAACACTTGGGAGTTGAATTTGATTGACCACCTTACTGATATTATTAGGGCTGAAGAAGATGATGATGTGGAAACTAATTTTCAAATGGCAAGCTGCACCCTTGAAGCTGGAGTCAAGATTTATTCATTAAGGGTGGATTCCGTGCATGCCACCGCATATAAAGTCCTCAGTGGGATGAATAGAGCTGGCCAAGAAGATGAGCAAGATACTACGCTGGATGGTGTTAATGCTGAAAATGGGCAAGAAGAAAGCAGGAAAGTAACGGCCAAAAAGTTGTCACCTTTCTCAACACTGGAATCATCTTTTGAGGTTCTTAATGTAAAGAAGTTTAATGCTGCATTTGCTGTGGATCCCCTCTTTCGCCAGACATCTGCACAATTTGATGAAGGTGGAGCCAAAGGTCTTTTGATGAATAGTCTCGGTGTCTATGGTGGATGCAAGCTGCTCTTTGATTCACTAGAAGTGCCAGGAAAATGCTTGGCAAGTCAAAGTGGACATGATATTTCAGATACGATTGATCTTTCTTTTGCCAGAGATTGTATTGAACAGATGGTATTGAGCATGCATACGAAGGATGAAATTTCTCCTACTCTAAGGGCGATAGTAGATCAATTTGATGAAAATAATAGAAGGTCTTCAGATTTTCAATTTTGTGGCCAGAAGCCAGCTGAAGAGTTTGAGGCAGCTATTGGTTGTGAAATTGAGGCTGAACGAGAAGAATACGAGAACTGCCAGCACTGGCGTGATGATCATGATGACCGAACATTTGTTGCTGATCTTGGCTCCAATGATGCATGCCCAAATTTTCATAGTTACCCTCAGGAAAAAGATCCTTTTCCTTCTGAAGCCCCTGATGACATGTTTCAGAATGTTGATTGGTATTTATTTCCTAGTCTGGGTTTTCTGTCAAAGAGAAATGCTTGGGCAGGTCCTGATCATTGGAGGTATCGAAAAGCTAAAGGCTCAGAGGTTCATTATACTTCTGAAGATGGGTTGACCCTCAACTCTCAGCAGCCAAGGACTAAGAGGCAGGTCAAAGTTGAATTAGACTTCAAAAATTTTCTAGAGAATCAAATGGTAGATATCTTTTCTCCTCCCAAGAATCCCAAATCGTTACTGCTCCCTGAAAATAGACCGCCTTGTAACACAAAACTTCCAGAGGACTGCCACTATGAACCAGAGGATCTTGTCAAATTATTTCTTTTGCCAAATGTAAAGTGTCTTGAGAGGAGTGGGAGAAAGTCCTCAGATGGATCAAGGGAGCAATACAATGACTATGAATCATTTCCTTCCTGGGATAATGGAGGTGTTTGTGATGACGAGTATGAAGGTGATGCACATAGTTACGTGAATGAGTCCAACATACTTATTTCTCAGCCTCGTCAGATCAATAAAACTGAAGTCCATTACGACAAAATTTCCAAACAAGTCGATGTTCAGGCACTGAAAATTACTCTTTGGGGCCATATTCAAGAATCTGTTCAATTTCCTCTTCAGGGTCAACAAGCAATGGTATCTTTCAGGCATATATTGGCCAACTTTCCTGGTGAATGTAATGCTGCTGCAACTCTTAGTGACATCTCTCCTCATTTGTGCTTCATATGTCTGTTGCATTTGGCTAACGAGAAAGGCTTGAGCATCCAAAGCTGCCCCAACTTGAATGATCTGAGCATTTATCTTTCTGATGTTTGCGTCACAACAAGCGGAATAGATTAG 2007 0.4375 MAETLSPDPTTGQRQRLPSMRSPTSAFFLGSNNDHLERAQARAARAAAVRRKSLAAANLHHQHLDDAGSDHCLNKQQILVLFHNCIKLASENKINQKNTWELNLIDHLTDIIRAEEDDDVETNFQMASCTLEAGVKIYSLRVDSVHATAYKVLSGMNRAGQEDEQDTTLDGVNAENGQEESRKVTAKKLSPFSTLESSFEVLNVKKFNAAFAVDPLFRQTSAQFDEGGAKGLLMNSLGVYGGCKLLFDSLEVPGKCLASQSGHDISDTIDLSFARDCIEQMVLSMHTKDEISPTLRAIVDQFDENNRRSSDFQFCGQKPAEEFEAAIGCEIEAEREEYENCQHWRDDHDDRTFVADLGSNDACPNFHSYPQEKDPFPSEAPDDMFQNVDWYLFPSLGFLSKRNAWAGPDHWRYRKAKGSEVHYTSEDGLTLNSQQPRTKRQVKVELDFKNFLENQMVDIFSPPKNPKSLLLPENRPPCNTKLPEDCHYEPEDLVKLFLLPNVKCLERSGRKSSDGSREQYNDYESFPSWDNGGVCDDEYEGDAHSYVNESNILISQPRQINKTEVHYDKISKQVDVQALKITLWGHIQESVQFPLQGQQAMVSFRHILANFPGECNAAATLSDISPHLCFICLLHLANEKGLSIQSCPNLNDLSIYLSDVCVTTSGID* 669
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod10g1401 668 PANTHER CONDENSIN COMPLEX SUBUNIT 2 1 661 IPR022816 GO:0000796|GO:0007076
Dod10g1401 668 Pfam Condensin complex subunit 2 544 655 IPR022816 GO:0000796|GO:0007076
Dod10g1401 668 Pfam Condensin complex subunit 2 18 519 IPR022816 GO:0000796|GO:0007076
Dod10g1401 668 PIRSF Condensin_H 1 276 IPR022816 GO:0000796|GO:0007076
Dod10g1401 668 PIRSF Condensin_H 268 550 IPR022816 GO:0000796|GO:0007076
Dod10g1401 668 PIRSF Condensin_H 542 659 IPR022816 GO:0000796|GO:0007076
Dod10g1401 668 PANTHER CONDENSIN COMPLEX SUBUNIT 2 1 661 - -
Dod10g1401 668 MobiDBLite consensus disorder prediction 1 23 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod10g1401 Dod-Chr10 34310759 34314613 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod10g1401 K06676 - gmx:100799781 910.212
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod10g1401 10 34310759 34314613 Dod03g2275 03 53115181 53120488 PCT