Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod10g1353 ATGATAGGCACATCAAAGCTACTACTACCCTTGCATCATTATTCTTCATCATCACTAGATCATGTGTCTAATAAGCCAACCACACTTGATCATGTTGTGTTTGGCATTGCCTCAAGCGGGGCTTCATGGCCTAAGAGGAAGGAATATACCAAACTATGGTGGAGCAAACCCAACAATAATTGTACTATGAGGGGATGTGTATTCGTTGATACTCTCCCAGTTGAAGATCATCACAATGCAAAAAACAATGATACTAGTTCTTCTTCTCTTCCTCCACTATGTGTCTCTCAAGACACATCACGGTTTCGCTACACTTGCCGGGGTGGTCTTCGATCAGCAATCCGTGTGGCACGTGTTGTGAAGGAGATTATGGCCCTTAATCATTCTGATGTTAGATGGTATGTGTTTGGGGATGATGACACGGTTTTCTTCCCTGAGAATCTGTTGAAGACACTCTCCAAGTATGATCATAGGCTTTGGTACTACATTGGCTCAAACTCCGAGAGTTACAAGCAGAACTGGTTCTTTGGTTTTGGAATGGCTTTTGGTGGAGCAGGTTTTGCTATCAGCTCCTCTCTGGCAAAAGTGTTGGCAAAGGTCTTTGATTCGTGTATAGAAAGGTACCCGCATGTGTATGGAAGTGATTCCAGGGTTGATTTAAAGGGAAATGCCTTTGGCCTATTGGCTGCACATCCAGTAACTCCCTTGTTATCCCTTCATCACCCAGATTACACAGATCCAATCTTTCCCAACATGACAACCATAAAAGCTTTTCAGCATTTATTTGAAGCAGTTAATGTTGACTCCCATAGGATCCTACAACAAACAGTTTGCTATGAGAAACAGGTTTCATGGACCATTTCAGTGTCATGGGGTTATGCTGTTCAAGTATTCCAGAACAGTATGCTTTTGCCAGATGTTCTGGGCGTTCAAGGAACATTCACGCACTGGACAAAAGGAAATGTTTTGTCAACCCTCTACACTTTCAACACAAGAGAATTTCACCCTGACCCATGTAGGAGACCCACCATTTTCTATCTTGAAAATGTGTCCTCTGGTAAAGATGGTATCATAAGCAATTATAGGAAATATTTCCTAAATTGCTCATACGATGTGAAATCACCAACGAGATTGGAAATGATCAAAGTGGTCTCTAACAAGTTAGAGCTAGATATCAGACAGCAGTTGCAGAGTCCAAGAAGGCATTGTTGTGATGTATTGAACTCTAGCGCTCGTGACATAATGGAAATTGGAATAAGAGAATGCAAAGATGATGAATTGATTTATATGCACTGA 1296 0.4159 MIGTSKLLLPLHHYSSSSLDHVSNKPTTLDHVVFGIASSGASWPKRKEYTKLWWSKPNNNCTMRGCVFVDTLPVEDHHNAKNNDTSSSSLPPLCVSQDTSRFRYTCRGGLRSAIRVARVVKEIMALNHSDVRWYVFGDDDTVFFPENLLKTLSKYDHRLWYYIGSNSESYKQNWFFGFGMAFGGAGFAISSSLAKVLAKVFDSCIERYPHVYGSDSRVDLKGNAFGLLAAHPVTPLLSLHHPDYTDPIFPNMTTIKAFQHLFEAVNVDSHRILQQTVCYEKQVSWTISVSWGYAVQVFQNSMLLPDVLGVQGTFTHWTKGNVLSTLYTFNTREFHPDPCRRPTIFYLENVSSGKDGIISNYRKYFLNCSYDVKSPTRLEMIKVVSNKLELDIRQQLQSPRRHCCDVLNSSARDIMEIGIRECKDDELIYMH* 432
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod10g1353 431 Pfam Fringe-like 125 198 IPR003378 GO:0016020|GO:0016757
Dod10g1353 431 Gene3D - 20 221 - -
Dod10g1353 431 Pfam Protein of unknown function, DUF604 217 404 IPR006740 -
Dod10g1353 431 PANTHER FRINGE-RELATED 217 429 - -
Dod10g1353 431 PANTHER FRINGE-RELATED 14 218 - -
Dod10g1353 431 PANTHER TRANSFERRING GLYCOSYL GROUP TRANSFERASE 14 218 - -
Dod10g1353 431 PANTHER TRANSFERRING GLYCOSYL GROUP TRANSFERASE 217 429 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod10g1353 Dod-Chr10 33709026 33710868 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod10g1353 11 397 Glycosyltransferase AT1G05280 54.106 1.42e-144 418
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod10g1353 - - gmx:100813816 598.971
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod10g1353 10 33709026 33710868 Dod10g1353 10 33709026 33710868 ECH
Dod10g1353 10 33709026 33710868 Dod03g2217 03 52166819 52169503 PCT