Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod10g1352 ATGCAGCGAACTCAAAAAACCACCAAAACCCAATATCTGAAAAAGTTCATTTTATTAATCTCCGCTTCATTTTGTGCCACTTATGTCCTTGTATCAACACAAAAGATAGACACATCAAAGCTACTATTAGACTTGCATCATTATTCTTCATCATCACAAGATCATGTATCTGATAAGCCAACCACACTTGATGATGTTGTGTTTGGCATTGGTTCAAGTGGGGCTTCATGGCCTGAGAGGAAGGAATACACCAAACTATGGTGGAACAAACCCAACAATAATAGTACTATGAGAGGATGTGTATTCGTTGATACCCTCCCAGTTGAAGATCATCAAAATGCAAGCAATGATACTAGTTCTTCTCCTCCACTATGTGTCTCTCAAGACACATCACGGTTTCGCTACACTTACCGTCATGGTTTTCGATCAGCGATCCGCATGGCACGTGTTGTCAAAGAGACTGTGGAACTGAACCATTCTGCTGTTAGATGGTATGTGTTTGGGGATGATGACACGGTTTTCTTCACTGAGAATCTGATGAAGACACTCTCCAAGTATGATCACAGGCTTTGGTACTACATTGGCTCAAACTCCGAGAGTTACAGGCAGAACAACTTCTTAGGTTTCGCAATGGCTTTTGGTGGAGCAGGTTTTGCTATCAGCTCCCCTCTGGCAAAAGTGCTGGCCAAGTTCTTTGATTCCTGTATAGAAAGGTACCCACATTTGCATGGAAGTGATTCCAGGGTGTACTCTTGTATAATGGAGCTAGGTGTTGCCTTAACACGTGAACCCGGTTTTCACCAGGTTGATGTGACGGGAAATATCTTTGGCCTATTGGCTGCACATCCAGTAACTCCCTTGGTGTCCCTCCATCACCCAGGTTGCACGGATCCAATCTTTCCCAACATGACACCTATAAAAGCTTTTCAGCATTTATTTGAAGCAGTTAATGTTGATTCCCAGAGGATCCTGCAACAAACAGTTTGCTACGAGAAACGGTTTTCATGGACAATTTCAGTGTCATGGGGTTATGCTGTTCAAGTATTCCCGAACAACATGCTTTTGCGAGATGTTCTGAGCGTTGAAAAAACATTCAATGACTGGACAAAAGGAAATATTTTGTCAGCCTATTATTCTTTCAACACAAGAGAGCTTCACCCTGACCCATGTTGGAGGCCCACCATTTTCTATCTTGAAAATTTGTCCTCTGGCAAAGATGGCATCATAATAAGCAATTATAGGAAATATTTCCAAAATTGCTCATACAATGTGAAATCACCAAGGAGATTGGAAATGATCAAAGTGGTCTCGAACAAGTTAGAGCTAGATATCAAACAGTTGCAGAGTCCAAGAAGGCACTGTTGTGATGTATTGAACTCTAGCACTCATGACATAATGGAAATTGGAATAAGAGAATGCAAAGATGATGAATTTATTTATATGCATTGA 1449 0.412 MQRTQKTTKTQYLKKFILLISASFCATYVLVSTQKIDTSKLLLDLHHYSSSSQDHVSDKPTTLDDVVFGIGSSGASWPERKEYTKLWWNKPNNNSTMRGCVFVDTLPVEDHQNASNDTSSSPPLCVSQDTSRFRYTYRHGFRSAIRMARVVKETVELNHSAVRWYVFGDDDTVFFTENLMKTLSKYDHRLWYYIGSNSESYRQNNFLGFAMAFGGAGFAISSPLAKVLAKFFDSCIERYPHLHGSDSRVYSCIMELGVALTREPGFHQVDVTGNIFGLLAAHPVTPLVSLHHPGCTDPIFPNMTPIKAFQHLFEAVNVDSQRILQQTVCYEKRFSWTISVSWGYAVQVFPNNMLLRDVLSVEKTFNDWTKGNILSAYYSFNTRELHPDPCWRPTIFYLENLSSGKDGIIISNYRKYFQNCSYNVKSPRRLEMIKVVSNKLELDIKQLQSPRRHCCDVLNSSTHDIMEIGIRECKDDEFIYMH* 483
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod10g1352 482 PANTHER FRINGE-RELATED 10 480 - -
Dod10g1352 482 Gene3D - 54 330 - -
Dod10g1352 482 PANTHER TRANSFERRING GLYCOSYL GROUP TRANSFERASE 10 480 - -
Dod10g1352 482 Pfam Protein of unknown function, DUF604 203 455 IPR006740 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod10g1352 Dod-Chr10 33702708 33705060 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod10g1352 16 447 Glycosyltransferase AT1G05280 54.005 2.58e-162 466
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod10g1352 - - gmx:100813816 650.588
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod03g2217 03 52166819 52169503 Dod10g1352 10 33702708 33705060 PCT