Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod10g1137 ATGCTTTACAAATTCTTTTCAAACCAGGGAATCCATCCGTCAATTAGGGGAGAAGTTTGGGAATTTCTGCTTGGTTGCTATGATCCCAAGAGTACATTTGAGGAAAGAGATCAGACAAGACAGCATCGAAGGCTGCAATATGCTAGATGGAAGGAAGAATGCCGCCAATTGTTTCCTTTTGTTGGAAGTGGTAGATATATCACATCACCTGTAATTACTGATGATGGTCATCCAATTCAAGATGCATTAGTTTTGCTAGAAACAAATCCAGACAAGGGATTGGTTATAGTCCCTCAGGATAACTATGGGCCTGCAGGTGTAGATGCTGCAAATAATTTAGAAAAGGTGACAGACAAGAAAGTAGTCCAGTGGATGTTAACTCTTCATCAAATAGGTCTTGATGTGATTCGCACAGATAGGACATTGGTTTTTTATGAGAAGCAAGAGAACTTGTCAAAATTATGGGATATTCTTGCTGTTTATGCTTGGATTGATAAAGACGTTGGCTATGGTCAAGGAATGAGTGATCTATGCTCCCCTATGATAATTCTTCTTGATGATGAAGCAGATGCATTTTGGTGCTTTGAGCGTCTGATGCGCAGACTTCGAGGAAATTTCAGATGCACTGGTAATTCTGTTGGGGTGGAGGCTCAGCTAAGTAATTTGGCTTCAATTACACAAATAATTGATCCAAAACTTCATAAACATTTAGAGCATCTTGGTGGAGGTGACTATTTGTTCGCTTTTCGAATGATAATGGTTCTGTTTCGTCGAGAATTCTCCTTTTGTGATTCATTACACCTTTGGGAGATGATGTGGGCTCTAGAATATGATCCTGATTTGTTCTTGATGTATGAAGATCCTCAATCAGCTTCTGAAAAAGCTGAAGGCTATAAAGGGAAAGTGAAGTCAATACGTCAATGTGGAAAGTATGAGAGAGAAAATATGAAAAATGGAGCAAAGAATGCTGAAGCTCCTCTTCCTATGTCCATATTCCTTGTTGCTAGTGTGTTGAAAGATAAAAGCACAAAACTACTCCAAGAAGCACGGGGTTTGGATGATGTTATCAAGATATTGAATGACATGACTGGAAATCTAGACGCCAAAAAAGCTTGCTCTGGGGCTATGAAACTTCACAAAAAGTATTTGAAAAAAGCCAAGAAGCACTAG 1170 0.3915 MLYKFFSNQGIHPSIRGEVWEFLLGCYDPKSTFEERDQTRQHRRLQYARWKEECRQLFPFVGSGRYITSPVITDDGHPIQDALVLLETNPDKGLVIVPQDNYGPAGVDAANNLEKVTDKKVVQWMLTLHQIGLDVIRTDRTLVFYEKQENLSKLWDILAVYAWIDKDVGYGQGMSDLCSPMIILLDDEADAFWCFERLMRRLRGNFRCTGNSVGVEAQLSNLASITQIIDPKLHKHLEHLGGGDYLFAFRMIMVLFRREFSFCDSLHLWEMMWALEYDPDLFLMYEDPQSASEKAEGYKGKVKSIRQCGKYERENMKNGAKNAEAPLPMSIFLVASVLKDKSTKLLQEARGLDDVIKILNDMTGNLDAKKACSGAMKLHKKYLKKAKKH* 390
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod10g1137 389 Pfam Rab-GTPase-TBC domain 118 274 IPR000195 -
Dod10g1137 389 ProSiteProfiles TBC/rab GAP domain profile. 10 276 IPR000195 -
Dod10g1137 389 PANTHER RAB-GTPASE-TBC DOMAIN-CONTAINING PROTEIN-RELATED 9 388 - -
Dod10g1137 389 SUPERFAMILY Ypt/Rab-GAP domain of gyp1p 3 236 IPR035969 -
Dod10g1137 389 SUPERFAMILY Ypt/Rab-GAP domain of gyp1p 214 382 IPR035969 -
Dod10g1137 389 PANTHER TBC1 DOMAIN FAMILY MEMBER GTPASE-ACTIVATING PROTEIN 9 388 - -
Dod10g1137 389 SMART tbc_4 7 299 IPR000195 -
Dod10g1137 389 Gene3D - 212 389 - -
Dod10g1137 389 Gene3D putative rabgap domain of human tbc1 domain family member 14 like domains 109 206 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod10g1137 Dod-Chr10 30717411 30724038 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod10g1137 - - aprc:113854580 674.085
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod10g1137 10 30717411 30724038 Dod10g1137 10 30717411 30724038 ECH