Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod10g1122 ATGGAATCGATACTAGCTCGTGCACTAGAGTACACCCTCAAGTACTGGCTCAAATCCTTCTCCAGGGACCAGTTCAAGCTTCAAGGCCGCACCCTTCACCTCTCCAATTTGGATATCGACGGGGATGTGTTGCATTCTAGCCTTGGATTGCCGCCAGCGCTTAATGTGGCCACCGCCAAAGTCGGCAAATTGGAGATCATGCTTCCTTCAGTGAGTAATGTGCAGGTAGAGCCAATCATTGTGCAAATTGATAGGCTTGATGTGGTTCTTGAGGAGAATGCTGATTTTGATGCATCTGTTAGTCCTAATAGTGCCACTCCATCGGCTGCCTCCCAGAAGGGTAGCGGGTATGGTTTTGCTGATAAGATTGCGGATGGCATGACTATACAAATTCTTACCGTTAATCTCTTACTTGAAACTCGTGGGGGTGCTCGTCGGAAAGGGGGAGCAACATGGACACCACCTATGGCATCTATCACAATACGCAACCTTTTACTGTATACCACAAATGAAAGCTGGCAGGTTGTAAATCTTAAGGAAGCAAGGGACTTCTCCAGTAACAAGAAGTACATATATGTCTTCAAAAAACTGGAATGGGAATCTTTGTCTATTGATCTTTTGCCGCATCCTGACATGTTCATGGATGCTACAATTACGGTTCAGAGAACTGAGTTGAACAGTCCACTTGGGCTTGAGGTTCAATTGCACATCAATGAAGCCATTTGCCCTGCATTAAGTGAACCAGGTCTGCGTGCACTTCTCCGCTTTATGACAGGATTATATGTTTGTCTAAACCGTGGTGATGTTGATTTAAAGGCTCAGCAGCGATCCACTGAAGCAGCTGGGCGTTCTCTTGTCTCAATTGTTGTAGATCATATATTTCTCTGTATTAAAGATACTGAGTTCCAGCTTGAGCTTTTGATGCAGTCCCTCTTTTTTTCTCGGGCTAGTCTTTCTGAAGGAGATAGTGACAATAACTTGACCAGGATTACAGTTGGTGGACTTTTTTTGAGGGACACCTTTTCATGTCCTCCATGTACCCTAGTGCAACCATCAATGCAAGCTGTCACAAAAGATGCTTTCCACGTGCCTGAATTTGCTAGAAGCTTTTGCCCCCCAATATATCCTCTAGGGGAACAGCAGTGGCAATTGATTGAGGGAACCCCTCTAATATGCCTCCATGCACTTCAGATCATGCCTTCTCCACGTCCACCATCCTTTGCTTCTCAAACAGTTATTGAGTGTCAGCCTCTGATGATTCATCTTCAGGAAGAAACATGCCTTAGGATATCCTCATTCCTAGCTGATGGTTTTGTTGTCAATCCTGGTGACATTTTACCGGATTTCTCAGTAAAATCTTTCATGTTCACTCTCAAGGGGCTGGAGCTTACAGTTCCCTTGGATAAGGTCGAATTTGATATTTCTAAAAGCGAAATGGAGAATAATACAGTCCAGACCTCCTTTACTGGAGCGAGGCTCCATATTGAAAGCCTTTCCTTTTTAGATACACCCTCATTGAAACTAAGAATGTTGAACCTGGAAAAGGATCCAGCTTGCTTCAGTCTTTGGGAAGGTCAACCAATCGATGCTAGCCAGAAGAAGTGGACTGCCCGAGCATCTCAGCTTACTTTGTCTCTGGAAGCATGTAATGGCACAACTGGACATCAAATTTCGCTTGGACAAACTGCAGGATTGTGGAGATGTGTTGATCTGAAAGATGCTTGCATTGAAGTAGCTATGGCCACAGCCGATGGCAGTCCATTGTTAAGAGCTCCTCCTCCAGGGGGTATTGTCAGGGTTGGAGTTGCTTGTGAGCAGTATCTATCCAACACTTCTGTTGAACAGTTATTTTTTGTCCTGGACCTCTACGGTTATTTTGGGAGAGTTAGTGAAAAAATAGCAATGGCTGGAAAAAAGAAACAATTGGAGGACATTAGGGACAAGTCTTCTAGTGGAAAGCTGATGGACAAGGTTCCTAGTGACACTGCTGTGAGTTTAACAGTGAAAGACCTCCAACTTCGATTTCTGGAGTCCTCTTCAGTGAATGTTGAGGGAATGCCTTTAGTACAGTTCATTGGAGATGATCTGTTCATTAGCGCCACCCACAGAACTCTTGGTGGTGCTATTGTTGTTTCGTCTACTTTACGTTGGGAGAGTGTTGAGATAGATTGTGTGGATGCTGAGGGGCACTTACCATGTGAAAATGGCTCATTCTTGAGCCCTAATGAAAATGTTTCCTCACCACATGAGAATGGATATCCTCAACTAAGAGCTGTTTTCTGGGTGGATAAGAACCAGAAACATTCAATAAATGGAAATGCTCATTCAGTCCCTTTTCTGGACATAAGCATGGTTCATGTCATTCCATTATATGAACAAGACATGGAGTCTCATAGTTTAAATGTCTCAGCTTTTGTATCTGGTGTTCGTCTTGGTGGAGGAATGAACTATGCTGAAGCCCTCTTGCATAGATTTGGAATACTTGGGCCTGATGGTGGCCCTGGGACTGGCCTTTGCAAAGGGTTGGAAAACTTGCGAAAAGGACCGTTGTCAAAACTTTTTAAGACAACACCTCTTGGTGATAGCTCAGAAGATGTCGAAAGTATGAGAGAAGGAAAAGAAACCAGTTTTCCACACTTGAAGAAGCCAGATGATGTGGATGTAACTATAGAATTGAGAGACTGGTTGTTTGCTCTTGAAGGTGCACAGCAGATGGCTGAACGGTGGTGGTTCTCCAGCCTTGAGGATGTAGACAGAGAAGAGAGGTGTTGGCACACAACTTTTCGTGCTGTACGTGCAAATGCAAAATCTAGCCCAAAGAATGTTCTGGATGGCAAAGCACAGTTGCATAGAATAAAACAAAATCCAATAGAGCTTGTTACGGTTGGAGTTGAAGGGTTGCGAATCATGAAGCCTCAGACCCACAAAGACACTCCTTCATCAATGTTAATTGCAAATGGGGATAAAGAATATACTAACATGGCTGAGGGAGTTGGTCTTGAAGTTCGCTTGAAATGTGAGGATAATGTTGATGATGAAATGGTTAGTTGGGAAGTGGAAGACTTAAAATTCTCTGTCAAACAACCGATTGAGGCAGCTGTCACCAAGGATGAGCTTCAGCACCTCACTTTCCTGTGCAAATCTGAAATTGACTCAATTGGCCGAATAACTGCTGGGATTTTACGGCTGCTTAAGCTAGAAGATTCTGTCGGTCAGTCTGTAATAGATCAACTAGGCAACCTAGGAAGCGAAGGCATTGACAAATTCTTCTCTTATCAAAAGGTCGGCAGAGATGGTAGTGTTGGTAGTAGAGGACATTCTCCCTTGCCAAACCTCATTAACGAAGGATCGCCAAAAACTATGGAACAAACAGTAACTTTGCTTGAGGAAGCGGTTTTGGATTCACGGGCCAGACTTGATGAGTTAATCACTTCTGTTGGTACTTCAGAGTCTTCGTCCTCTCAGCACCTTACCATCATCAAACTGAGTCAAAAGATTGAGACCATTCAGGGCTTATTGATGCAATTGCGGAATCAAATTTAA 3543 0.438 MESILARALEYTLKYWLKSFSRDQFKLQGRTLHLSNLDIDGDVLHSSLGLPPALNVATAKVGKLEIMLPSVSNVQVEPIIVQIDRLDVVLEENADFDASVSPNSATPSAASQKGSGYGFADKIADGMTIQILTVNLLLETRGGARRKGGATWTPPMASITIRNLLLYTTNESWQVVNLKEARDFSSNKKYIYVFKKLEWESLSIDLLPHPDMFMDATITVQRTELNSPLGLEVQLHINEAICPALSEPGLRALLRFMTGLYVCLNRGDVDLKAQQRSTEAAGRSLVSIVVDHIFLCIKDTEFQLELLMQSLFFSRASLSEGDSDNNLTRITVGGLFLRDTFSCPPCTLVQPSMQAVTKDAFHVPEFARSFCPPIYPLGEQQWQLIEGTPLICLHALQIMPSPRPPSFASQTVIECQPLMIHLQEETCLRISSFLADGFVVNPGDILPDFSVKSFMFTLKGLELTVPLDKVEFDISKSEMENNTVQTSFTGARLHIESLSFLDTPSLKLRMLNLEKDPACFSLWEGQPIDASQKKWTARASQLTLSLEACNGTTGHQISLGQTAGLWRCVDLKDACIEVAMATADGSPLLRAPPPGGIVRVGVACEQYLSNTSVEQLFFVLDLYGYFGRVSEKIAMAGKKKQLEDIRDKSSSGKLMDKVPSDTAVSLTVKDLQLRFLESSSVNVEGMPLVQFIGDDLFISATHRTLGGAIVVSSTLRWESVEIDCVDAEGHLPCENGSFLSPNENVSSPHENGYPQLRAVFWVDKNQKHSINGNAHSVPFLDISMVHVIPLYEQDMESHSLNVSAFVSGVRLGGGMNYAEALLHRFGILGPDGGPGTGLCKGLENLRKGPLSKLFKTTPLGDSSEDVESMREGKETSFPHLKKPDDVDVTIELRDWLFALEGAQQMAERWWFSSLEDVDREERCWHTTFRAVRANAKSSPKNVLDGKAQLHRIKQNPIELVTVGVEGLRIMKPQTHKDTPSSMLIANGDKEYTNMAEGVGLEVRLKCEDNVDDEMVSWEVEDLKFSVKQPIEAAVTKDELQHLTFLCKSEIDSIGRITAGILRLLKLEDSVGQSVIDQLGNLGSEGIDKFFSYQKVGRDGSVGSRGHSPLPNLINEGSPKTMEQTVTLLEEAVLDSRARLDELITSVGTSESSSSQHLTIIKLSQKIETIQGLLMQLRNQI* 1181
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod10g1122 1180 Coils Coil 1159 1179 - -
Dod10g1122 1180 PANTHER UNCHARACTERIZED 1 217 IPR026728 -
Dod10g1122 1180 MobiDBLite consensus disorder prediction 857 880 - -
Dod10g1122 1180 MobiDBLite consensus disorder prediction 864 880 - -
Dod10g1122 1180 PANTHER AMINO-TERMINAL REGION OF CHOREIN, A TM VESICLE-MEDIATED SORTER 216 1179 - -
Dod10g1122 1180 PANTHER AMINO-TERMINAL REGION OF CHOREIN, A TM VESICLE-MEDIATED SORTER 1 217 - -
Dod10g1122 1180 Pfam N-terminal region of Chorein or VPS13 1 98 IPR026854 -
Dod10g1122 1180 PANTHER UNCHARACTERIZED 216 1179 IPR026728 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod10g1122 - - gmx:100803142 1892.09
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod10g1122 10 30536839 30545271 Dod10g1122 10 30536839 30545271 ECH