Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod10g1121 ATGGGGATGAGGAGTGATCCACAGAAACAACAACAACAACAGGTGCTTCATCGTCAGGGTGGAGGTGTTGGTGGTGGTGGCAGAACCAATGGCTTTATTCCAAGCTCTTTTCGTGCTATCTCCAGCTACCTCAGGATTGTTTCATCTGGTGCTTCCACGGTTGCACGCTCTGCTGCATCGGTTGCTTCATCGATTGTTGATAGAGATGATGACGCTGACCATGATCAGGTCATCTGGGCTGGGTTTGACAAGTCAGAGGGTGAGGGTGAAATCATGCAGCAAGTACTTCTCCTAGGCTATCGGTCTGGCTTCCAGGTTTGGCATGTTGATGAATCAAATAATGTCCGGGACCTAGTTTCAAGACATGATGGTCCTGTATCTTTTATGCAAATGGTACCAAATCCAATTGCATCGAAGAGATCAGAAGACAAGTTTGCAGACAGCCGCCCACTGCTGGTAGTTTGTACTGATGGTTTCTTTGCTGGAAGTACCAATGTTCAGGATGGCTTGACTGCCCCTTACAATGGGAGCACTTCAAATTCACATGACCAAGTCAATGGCAACTATCTGCCAACTACTGTTCAGTTTTATTCAATGAAATCCCAATCATATGTTCATGTACTGAAGTTTAGATCAGTTGTCTATTCTGTAAGGTGCAGTTCTCGAATAGTTGCCGTTTCTCAATCCACACAGATACACTGTTTTGATGCTACAACATTAGAAAGGGAATATACTTTACTTACTAATCCTATAGTCATGAGCTGTCCTGGTTCTAGTGCCATAGGCTATGGACCACTTGCGGTGGGTCCAAGATGGCTGGCTTATAGTGGAAGCCCAGTTGTAGTCTCCGCTTCTGGGCATGTCAGCCCGCAACATTTGACACCTTCTGCAAGCCTTCCTGGTTTTTCTTCAAATGGAAGCTTGATCGCGCACTATGCTAAGGAGTCCAGCAAGCATCTTGCTTCTGGGATTGTGACCCTTGGAGATATGGGGTACAAGAAACTTTCCAGATACTGCTCTGATAACAATGGTTCATTACAATCTGTAACTACTGGCTCGAAGAGCAATGGAACCATCAATGGCCATTCAACAGACGCAGATAACATTGGAATGGTCATTGTTAAAGATATTGTCACAAAAAACGTTGTTGCCCAATTCCGGGCCCACAAGAGTCCGATATCTGCTTTATGTTTTGATCCTAGCGGCACCATTTTAGTTACTGCTTCAGTTCAGGGGCATAATATAAATGTTTTTAAGATAGTGCCTGGACAAGAGAATTTATCAGCCTCTGATGCTGGTCTTTCTTATGTTCATCTCTACAGGCTACAACGCGGCTTTACAAATGCGGTTATACAAGATATCAGTTTCAGTGATGACAGCAAGTGGATTATGATTAGTTCCTCAAGGGGCACTAGCCATCTGTTTGCCATAAATCCTCAAGGAGGATATGTAAACATTCAATCTTATGATGATAGTTTTACACCAAAAAATAATGGATTGAGTGTTACTACTAATCAAGCAATGCGCAGGTCCCATAGTTCATCTTTACAAATGCCTCAGCAGCAGAGCTTGTTTGCTTCTGGTCCTCCAATCACGCTTTCTGTAGTAAGCAGAATTAGGAATGGAGCTAATGGCTGGAGAGGTGCTGTGAGTGGTGCTGCTGCAGCTGCAGCTGGTAAGAAGAGCTTGCTTTCTGGGGCTATTGCTTCATCTTTCCGTAATATCAAAGGCAGTGGTGCCTTGTATGTTGACGGGAACTATTCCAAGGCAAAGCATCTTCTATTGGTTTTTTCACCCACCGGGTCCATGATACAATATGCTCTGCGGACAATAAATGGTCAAGATTCAGCCGTTGTTTCTGTATTAACCCCTGCTTATGAATCCATTCCACAAGCTGAGACAAGATTAGTAGTTGAAGCTATCCATAAATGGAATATATGCCAGAGGCATAGTCGGAGAGAAGATAATGTTGACATATATGGTGAGAGTGGAATTTCAGACAGCAACAAAATATATCCAGAGGAAGTGAAGGAGGAGAACCTCAACAGCCCCAAAATAAAGAATGTAACCATGAAAATGAATCTCTCTCTTGAGGAAGAGCATCATTTGTATATTTCAGAAGCTGAACTGCAAATGCATCAAGCTCATAAACCATTGTGGGCAAGGCCAGAGATATATTTTCATTCAATGTTGAAAGAGTCTACCACAATGATTGAAGAAACTGCTTCAGGAGGTGAATTTGAGATTGAAAAGATTCCAACTCGCATGATTGAAGCTAGGGCAAAAGACTTGATTCCAATTTTTGACTATATTCAGACCCCAAAAGTACAACTACCAAGAATTCATGCTGTGCATGGAAATGAACAACTGATGCATCAGAGTTCCCGGGTGTCTGGAAATGGCAGGATTTCAGCAGGTACTGTTTTGGGATCTCCTGAATATATCACTGATTCTGATGGTGCTGAATTTAAAAGTGGGATTGAAGGAACTGAGTGGGTTGATCATTTGGTGCCATCTGAGATGGTGGCCTCTGTAAATAAGAATGGCACTCTTAAACCAAATACTCAGCCTGAGATTGTAAATAATATAAGGGAGCACTTAAACATGGAGGCTCAACTCATGTTTGTAAATAGTGACAGAAGGCCTGAAAATGGAGAATCATTTTGA 2667 0.4271 MGMRSDPQKQQQQQVLHRQGGGVGGGGRTNGFIPSSFRAISSYLRIVSSGASTVARSAASVASSIVDRDDDADHDQVIWAGFDKSEGEGEIMQQVLLLGYRSGFQVWHVDESNNVRDLVSRHDGPVSFMQMVPNPIASKRSEDKFADSRPLLVVCTDGFFAGSTNVQDGLTAPYNGSTSNSHDQVNGNYLPTTVQFYSMKSQSYVHVLKFRSVVYSVRCSSRIVAVSQSTQIHCFDATTLEREYTLLTNPIVMSCPGSSAIGYGPLAVGPRWLAYSGSPVVVSASGHVSPQHLTPSASLPGFSSNGSLIAHYAKESSKHLASGIVTLGDMGYKKLSRYCSDNNGSLQSVTTGSKSNGTINGHSTDADNIGMVIVKDIVTKNVVAQFRAHKSPISALCFDPSGTILVTASVQGHNINVFKIVPGQENLSASDAGLSYVHLYRLQRGFTNAVIQDISFSDDSKWIMISSSRGTSHLFAINPQGGYVNIQSYDDSFTPKNNGLSVTTNQAMRRSHSSSLQMPQQQSLFASGPPITLSVVSRIRNGANGWRGAVSGAAAAAAGKKSLLSGAIASSFRNIKGSGALYVDGNYSKAKHLLLVFSPTGSMIQYALRTINGQDSAVVSVLTPAYESIPQAETRLVVEAIHKWNICQRHSRREDNVDIYGESGISDSNKIYPEEVKEENLNSPKIKNVTMKMNLSLEEEHHLYISEAELQMHQAHKPLWARPEIYFHSMLKESTTMIEETASGGEFEIEKIPTRMIEARAKDLIPIFDYIQTPKVQLPRIHAVHGNEQLMHQSSRVSGNGRISAGTVLGSPEYITDSDGAEFKSGIEGTEWVDHLVPSEMVASVNKNGTLKPNTQPEIVNNIREHLNMEAQLMFVNSDRRPENGESF* 889
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod10g1121 888 PANTHER BREAST CARCINOMA AMPLIFIED SEQUENCE 3 14 864 IPR045142 GO:0006914
Dod10g1121 888 SUPERFAMILY WD40 repeat-like 193 480 IPR036322 GO:0005515
Dod10g1121 888 PANTHER AUTOPHAGY-RELATED PROTEIN 18F 14 864 - -
Dod10g1121 888 Gene3D - 92 496 IPR015943 GO:0005515
Dod10g1121 888 Pfam Breast carcinoma amplified sequence 3 528 766 IPR022175 -
Dod10g1121 888 SMART WD40_4 201 236 IPR001680 GO:0005515
Dod10g1121 888 SMART WD40_4 379 419 IPR001680 GO:0005515
Dod10g1121 888 SMART WD40_4 435 476 IPR001680 GO:0005515
Dod10g1121 888 MobiDBLite consensus disorder prediction 1 18 - -
Dod10g1121 888 MobiDBLite consensus disorder prediction 1 29 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod10g1121 Dod-Chr10 30515170 30522419 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod10g1121 - - gmx:100784596 1340.48
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod10g1121 10 30515170 30522419 Dod10g1121 10 30515170 30522419 ECH