Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod10g1091 ATGTTTGTGACAATTTCAGGACTTTATAGGTATAGGGTGGGTGATGTGTTGAGGGTGGCTGGATTTAAGAACAAGGCCCCACAATTTAACTTCATTTGCAGAAAAAATGTTGTCCTGAGCATAGATTCCGACAAGACCGACGAGGTTGAGCTCCAGAATGCAATAAAAAATGCCATGACACACTTGATGCCGTTTGATGCATCTTTGGCCGAGTACACAAGCCATGCTGACACCACAACAATACCGGGCCATTATGTGCTTTATTGGGAGCTCACACTCGATGGTTCAACCCCTATCCCTCCATGTGTTTATGAGGATTGTTGCTTAGCCATTGAGGAGTCACTCAACAGCGTGTACCGCCAAGGCCGTGTCTCGGACAAGTCAATTGGACCACTTGAGATCAAGATTGTGGAGCAGGGAACATTTGACAAGCTCATGGACTATGCTATTAGCTTAGGTGCATCAATTAACCAGTACAAGACCCCAAGGTGTGTCAAGTTTGCCCCTGTGGTTGAGTTGTTGAACTCAAGGGTCATATCAAGCTATTTCAGTCCGAAATGTCCAAAATGGGTTCCGGGACACAAGCAGTGGAACAACAATCAGAACTGA 609 0.4565 MFVTISGLYRYRVGDVLRVAGFKNKAPQFNFICRKNVVLSIDSDKTDEVELQNAIKNAMTHLMPFDASLAEYTSHADTTTIPGHYVLYWELTLDGSTPIPPCVYEDCCLAIEESLNSVYRQGRVSDKSIGPLEIKIVEQGTFDKLMDYAISLGASINQYKTPRCVKFAPVVELLNSRVISSYFSPKCPKWVPGHKQWNNNQN* 203
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod10g1091 202 Pfam GH3 auxin-responsive promoter 4 166 IPR004993 -
Dod10g1091 202 PANTHER INDOLE-3-ACETIC ACID-AMIDO SYNTHETASE GH3.5 3 198 - -
Dod10g1091 202 PANTHER GH3 DOMAIN-CONTAINING PROTEIN 3 198 IPR004993 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod10g1091 Dod-Chr10 29817890 29818498 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod10g1091 5 184 EF-hand Containing Proteins AT1G23160 52.941 3.87e-61 198
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod10g1091 K14487 - gmx:100791987 381.719
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod10g1091 10 29817890 29818498 Dod10g1091 10 29817890 29818498 ECH