Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod10g1083 ATGGCTTCACAAAACTCCCAAACCCAGTTCCAAGATTACTTGCCCTTGATGGTCAACAAGCTTGGTGGGGATGGCCTAATTGATGAGCTTTGCAATGGCTTCAATCTTTTGAAGGACTCTGATAAAGGGGTCATCACATTTGACAGCCTCAAGAGGAACTCAGCTTTGCTTGGTCTTCAGGGTTTGAGTGATGAGGATCTTAGATCCATGCTTGTGGAAGGTGACTTTGATGGTGATGGAGCCCTCAATCAGTTGGAGTTCTGTGTGTTGATGTTTAGATTGAGCCCTGAGCTCATGGAAGGGTCAAGATTGTGGTTGGAGCATGTCATTCAACAGGAACTCAAAGATTGTTTCTGA 357 0.451 MASQNSQTQFQDYLPLMVNKLGGDGLIDELCNGFNLLKDSDKGVITFDSLKRNSALLGLQGLSDEDLRSMLVEGDFDGDGALNQLEFCVLMFRLSPELMEGSRLWLEHVIQQELKDCF* 119
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod10g1083 118 SUPERFAMILY EF-hand 4 91 IPR011992 -
Dod10g1083 118 PANTHER CALCIUM-BINDING PROTEIN KIC 1 116 IPR044205 GO:0005509
Dod10g1083 118 ProSitePatterns EF-hand calcium-binding domain. 75 87 IPR018247 -
Dod10g1083 118 ProSiteProfiles EF-hand calcium-binding domain profile. 62 97 IPR002048 GO:0005509
Dod10g1083 118 Pfam EF-hand domain pair 42 93 IPR002048 GO:0005509
Dod10g1083 118 PANTHER CALCIUM-BINDING PROTEIN KRP1 1 116 - -
Dod10g1083 118 Gene3D - 7 117 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod10g1083 Dod-Chr10 29619966 29620322 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod10g1083 4 114 EF-hand Containing Proteins AT5G54490 64.286 1.19e-48 150
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod10g1083 K24345 - gmx:100500465 207.223
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod10g1083 10 29619966 29620322 Dod10g1083 10 29619966 29620322 ECH