Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod10g1057 ATGCTGAAGTTGGGGTTTTGCTTGTTTTTGTATGGTTTTGAAGATGAACCTGGGAAGCAGGTTAGGAGTGCTGTGCGGTTAAAAAACAGAAGCAAGTCTCATGTTGCTTTCAAGTTTCAAACTACGGCACCAAAGAGTTGTTATATGCGGCCCCCTGGTGGTATTCTTGCTCCTGGTGAAAGCTTAATTGCTACTGTGTTTAAGTTTGTGGAGCAACCTGAGAACAATGAAAAGCTGTCGGAGCAGAAGAACAAGGTGAAGTTCAAAATCATGAGTCTCAAAGTGAAAGAAGGAGTGGACTACGTACCTGAGCTGTTTGATGAACAAAAGGATCTAGTCACAGTGGAACGAATCTTGAGGGTTGTATTTATAGATCCAGAACGCCCTAGTCCTGCCTTGGAAAAACTGAAGAGGCAGTTGGCTGAAGCTGATGCTGCAGTTGAAGCTCGAAAGAAGCCTCCTGCAGAGGCGGCAGGTCCTCGAGTTGTTGCTGAAGGACTTGTAATTGATGAATGGAAAGAAAGAAGGGAGAAGTACCTGGCCAGGCAACAAGTTCAAGCAGTAGATTCAGTTTGA 576 0.4479 MLKLGFCLFLYGFEDEPGKQVRSAVRLKNRSKSHVAFKFQTTAPKSCYMRPPGGILAPGESLIATVFKFVEQPENNEKLSEQKNKVKFKIMSLKVKEGVDYVPELFDEQKDLVTVERILRVVFIDPERPSPALEKLKRQLAEADAAVEARKKPPAEAAGPRVVAEGLVIDEWKERREKYLARQQVQAVDSV* 192
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod10g1057 191 Gene3D Immunoglobulins 10 128 IPR013783 -
Dod10g1057 191 SUPERFAMILY PapD-like 13 134 IPR008962 -
Dod10g1057 191 Pfam MSP (Major sperm protein) domain 13 110 IPR000535 -
Dod10g1057 191 PANTHER VESICLE-ASSOCIATED PROTEIN 4-1 10 190 - -
Dod10g1057 191 PANTHER VESICLE-ASSOCIATED MEMBRANE PROTEIN-ASSOCIATED PROTEIN 10 190 IPR016763 GO:0005789
Dod10g1057 191 ProSiteProfiles Major sperm protein (MSP) domain profile. 1 124 IPR000535 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod10g1057 Dod-Chr10 28896814 28899449 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod10g1057 - - gmx:100792909 324.324
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod10g1057 10 28896814 28899449 Dod10g1057 10 28896814 28899449 ECH