Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod10g1029 ATGAATTTCTTGCAACGCAGGTTTGTCAGCCAGCAAATTAGGGAAACATCACACGAGGTGATTAGATTCGCAGCAAAAAGGAGAGTTGTGGAGCCATGTGACGTGTTCCTGAACCATAGGTGCAGGGACACAAAGAAGACAGTGGCAACACTTCTGTACGACCACTTAAGAAGAAACGGGTTCAGCCCTTTCTTGGACAACAAGAACATGAAGCCAGGGGACAAGCTGTTCGACAAGATCAATGGTGCGGTTCTTGAGTGCAAGATTGGTGTTGCCGTGTTCTCGCCCCGGTATTGCGAGTCCTACTTCTGCCTCCACGAGCTGGCGCTTCTGATGGGGTTCAGGAAGAAGGTGATACCGATCTTTTGCGATGTGAAGCCTTCTCAGCTGCGTGTTGTCAACAATGGCAAGTGGTCCGAGGAGGATCTCCGGAGGTTCAGATGGGCTCTTGAGGAGTCCAAGAACATCGTTGGACTCACGTTCAACTCCTCAAAAGGGAGCTTGTCCGAAATTGTGAACAGTGCTACTGAAATCATCATTGGAAGCATGATAGAGCTTGAGAATGAAAAGCATCAAAACATGCCAATTGCTCTTTAG 597 0.4841 MNFLQRRFVSQQIRETSHEVIRFAAKRRVVEPCDVFLNHRCRDTKKTVATLLYDHLRRNGFSPFLDNKNMKPGDKLFDKINGAVLECKIGVAVFSPRYCESYFCLHELALLMGFRKKVIPIFCDVKPSQLRVVNNGKWSEEDLRRFRWALEESKNIVGLTFNSSKGSLSEIVNSATEIIIGSMIELENEKHQNMPIAL* 199
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod10g1029 198 SMART till_3 32 156 IPR000157 GO:0007165
Dod10g1029 198 Pfam TIR domain 34 131 IPR000157 GO:0007165
Dod10g1029 198 PANTHER TOLL-INTERLEUKIN-RESISTANCE (TIR) DOMAIN FAMILY PROTEIN 28 193 - -
Dod10g1029 198 SUPERFAMILY Toll/Interleukin receptor TIR domain 33 158 IPR035897 -
Dod10g1029 198 Gene3D - 30 184 IPR035897 -
Dod10g1029 198 PANTHER COP1-INTERACTING PROTEIN-RELATED 28 193 - -
Dod10g1029 198 ProSiteProfiles TIR domain profile. 31 179 IPR000157 GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod10g1029 Dod-Chr10 28371890 28372636 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod10g1029 35 162 Miscellaneous Gene Families AT1G57670 31.944 4.58e-11 59.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod10g1029 - - adu:107462512 327.405
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod10g1029 10 28371890 28372636 Dod10g1029 10 28371890 28372636 ECH