Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod10g1012 ATGGGGAAGAAGAAGGAGAAGAGGGTGAACGTGTCAGGGAAGCCAAAGCACTCCCTGGACGTGAACCGCAGCAATGACTCCTCCAAGAACGACACCCGCTCCGCCGCCACCGTCCGCCGCCTCAAGATGTACAACACAAGGCCCGTCCGCGACCGCAAGGGCAAGATCCTCTCCCACGAGTTCCAGTCCAAGGACCTGCCCGCCACCCGCATCCAGCCTGACCGCCGCTGGTTCGGGAACACTCGTGTTGTGAATCAGAAGGAGCTGGAGTTCTTCAGGGAAGAGCTGCAGAGCCGAATGTCCAGTAATTACAATGTTATCCTCAAGGAGAAGAAGCTTCCCTTGTCGCTCCTCAACGATCGGCAGAAGCAAGCAAGGGTTCACCTTCTTGATAGAGAGCCTTTCACGGATGCGTTTGGGCCTAAGACTAAGAGAAAGCGTCCTACCCTCATGGCAGCTGATTATGAGTCCTTGGCTAAGAAAGCCGATGGTTCTCAAGAGGCTTTTGAACAAAAGTTTGGTGCTAGTGGATCTTCAGAAGCTAATGAAGGGGATGGTTTCAGGGATTTAGTGCGTCATACGATGTTTGAAAAAGGTCAAAGTAAACGTATTTGGGGTGAGCTCTACAAGGTGATAGATTCCTCGGATGTTGTTGTCCAGGTTCTAGATGCAAGGGACCCACAAGGCACAAGATGTTTCCATTTGGAGAAGCATTTGAAGGAAAATTGCAAGCACAAACACATGGTTCTTTTACTCAACAAGTGTGATCTAGTTCCTGCTTGGGCAACAAAAGGATGGCTTCGAGTTTTGTCAAAAGAATATCCGACTCTAGCATTCCATGCAAGCATTAACAAGTCCTTTGGAAAGGGTTCACTTCTATCAGTTCTGAGACAATTTTCTCGATTGAAAAGTGATAAGCAAGCTATATCTGTTGGATTTGTTGGATATCCAAATGTTGGGAAATCATCAGTGATCAATACATTGCGTACAAAGAATGTCTGCAAGGTTGCTCCAATTCCAGGGGAAACAAAAGTCTGGCAGTATATAACACTTACAAAGAGGATCTTTTTGATTGATTGTCCTGGTGTTGTCTACCACAACAGTGATTCTGAAACAGATGTGGTGCTGAAGGGTGTGGTACGTGTAACAAACTTGCAAGATGCTGCTGACCATATTGGTGAGGTTTTGAAACGTGTGAAGAAGGAGCACCTTGAAAGAGCATATAGAATAAAAGAGTGGGATGATGAAAATGACTTCCTACTTCAGCTTTGCAAATCAACGGGAAAACTTCTGAAGGGGGGTGAGCCTGACCTGATGACGGCAGCAAAGATGGTACTTCATGACTGGCAGAGGGGTAGAATTCCCTTTTTTGTTCCCCCTCCACGGCAAGATGACTCGCCTGAGGAACCCAATGTTAATGGTGTAGACATAGATGAAGCAGTTGATGGCACCCAGGCATCTGCAGCTATTAAAGCTATTGCAAATGTTCTTTCGTCCCAGCAACAAAGAAGCGTCCCTGTTCAAAGGGATTTATACAACGAGACTGAGTTGAAGGGAGAAGAAACTACTGACCAACTTCCAAACACGGGGGACAATTCAGATGAGGAGAATCCAAACACGGGGGATGACAATTTAGACGAAGAGAATCCAATCTCTGATAGTGACACATCTGATTAG 1677 0.4657 MGKKKEKRVNVSGKPKHSLDVNRSNDSSKNDTRSAATVRRLKMYNTRPVRDRKGKILSHEFQSKDLPATRIQPDRRWFGNTRVVNQKELEFFREELQSRMSSNYNVILKEKKLPLSLLNDRQKQARVHLLDREPFTDAFGPKTKRKRPTLMAADYESLAKKADGSQEAFEQKFGASGSSEANEGDGFRDLVRHTMFEKGQSKRIWGELYKVIDSSDVVVQVLDARDPQGTRCFHLEKHLKENCKHKHMVLLLNKCDLVPAWATKGWLRVLSKEYPTLAFHASINKSFGKGSLLSVLRQFSRLKSDKQAISVGFVGYPNVGKSSVINTLRTKNVCKVAPIPGETKVWQYITLTKRIFLIDCPGVVYHNSDSETDVVLKGVVRVTNLQDAADHIGEVLKRVKKEHLERAYRIKEWDDENDFLLQLCKSTGKLLKGGEPDLMTAAKMVLHDWQRGRIPFFVPPPRQDDSPEEPNVNGVDIDEAVDGTQASAAIKAIANVLSSQQQRSVPVQRDLYNETELKGEETTDQLPNTGDNSDEENPNTGDDNLDEENPISDSDTSD* 559
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod10g1012 558 CDD NGP_1 207 363 - -
Dod10g1012 558 MobiDBLite consensus disorder prediction 1 35 - -
Dod10g1012 558 MobiDBLite consensus disorder prediction 498 558 - -
Dod10g1012 558 MobiDBLite consensus disorder prediction 536 558 - -
Dod10g1012 558 Gene3D - 366 458 IPR023179 -
Dod10g1012 558 Gene3D - 195 365 IPR027417 -
Dod10g1012 558 Pfam 50S ribosome-binding GTPase 311 413 IPR006073 GO:0005525
Dod10g1012 558 Pfam NGP1NT (NUC091) domain 43 167 IPR012971 -
Dod10g1012 558 PANTHER NUCLEOLAR GTP-BINDING PROTEIN 2 7 547 IPR024929 GO:0005730
Dod10g1012 558 PANTHER GTP-BINDING PROTEIN-RELATED 7 547 - -
Dod10g1012 558 MobiDBLite consensus disorder prediction 456 475 - -
Dod10g1012 558 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 201 436 IPR027417 -
Dod10g1012 558 MobiDBLite consensus disorder prediction 1 27 - -
Dod10g1012 558 PRINTS GTP1/OBG GTP-binding protein family signature 357 372 IPR006073 GO:0005525
Dod10g1012 558 PRINTS GTP1/OBG GTP-binding protein family signature 311 331 IPR006073 GO:0005525
Dod10g1012 558 ProSiteProfiles Circularly permuted (CP)-type guanine nucleotide-binding (G) domain profile. 205 366 IPR030378 GO:0005525
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod10g1012 Dod-Chr10 28177414 28182543 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod10g1012 K14537 - gmx:100788649 975.311
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod10g1012 10 28177414 28182543 Dod10g1012 10 28177414 28182543 ECH