Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod10g1004 ATGGCCACCGTACAACTCCAATCCCTCAGCCTCTCTCGCTCCTCCGCCCTCTCACCTCCGACCACCGTCTCCTCCCTCTCCGGCCGCTGGAGCTCCCTTAATCTGCCGCGCTACGCCGGACTCAAGCTCAGGGTCGCCGCCGCGACTCAATTTTCCGGCTTCCCGAGTCGCGCCGGGTCGAGAATCGCCACCCGCGTTGGTGGACGCGTCGCCTGTGAGGCTCAAGACACCGCCGCCGTTCAAGTGGCTCCTATTACTGATGCAAATTGGCAATCACTTGTTCTTGACGCCGACACTGCTGTCTTGGTCGAATTCTGGGCCCCATGGTGTGGTCCCTGCCGTATGATCCACCCAATAATCGATGAGCTAGCAAAGGAATATTCTGGGAAGCTCAAGTGCTACAAACTCAACACTGATGAGAGCCCTTCAACTGCCACCCGGTATGGGATTAGGAGCATCCCAACTGTGATCATATTCAAGAATGGTGAGAAGAAAGATGCAGTTATTGGTGCTGTGCCAAAGACCACGTTGACCACAAGCATAGAAAAATTCTTGTGA 558 0.5538 MATVQLQSLSLSRSSALSPPTTVSSLSGRWSSLNLPRYAGLKLRVAAATQFSGFPSRAGSRIATRVGGRVACEAQDTAAVQVAPITDANWQSLVLDADTAVLVEFWAPWCGPCRMIHPIIDELAKEYSGKLKCYKLNTDESPSTATRYGIRSIPTVIIFKNGEKKDAVIGAVPKTTLTTSIEKFL* 186
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod10g1004 185 ProSiteProfiles Thioredoxin domain profile. 72 185 IPR013766 -
Dod10g1004 185 PANTHER THIOREDOXIN M-TYPE PROTEIN 1 185 - -
Dod10g1004 185 TIGRFAM thioredoxin: thioredoxin 86 184 IPR005746 GO:0015035
Dod10g1004 185 Pfam Thioredoxin 82 182 IPR013766 -
Dod10g1004 185 SUPERFAMILY Thioredoxin-like 80 185 IPR036249 -
Dod10g1004 185 CDD TRX_family 88 182 - -
Dod10g1004 185 ProSitePatterns Thioredoxin family active site. 102 120 IPR017937 -
Dod10g1004 185 PANTHER GEO12009P1 1 185 - -
Dod10g1004 185 Gene3D Glutaredoxin 81 185 - -
Dod10g1004 185 PRINTS Thioredoxin family signature 101 109 - -
Dod10g1004 185 PRINTS Thioredoxin family signature 109 118 - -
Dod10g1004 185 PRINTS Thioredoxin family signature 149 160 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod10g1004 Dod-Chr10 28093045 28096039 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod10g1004 K03671 - gmx:100811845 256.144
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod10g1004 10 28093045 28096039 Dod10g1004 10 28093045 28096039 ECH