Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod10g1002 ATGGAGGAGGAGCTGGTGCAGGAGCACCCTCCCATCCCCGAAACCTTCCTATACGAAACCCTCAGCCCTCTCTCCCTCTCCGCCTCCGCCGCCGCCGCCGCCGACGGAGCCGGCCGCCACTCTCCTCTCTCCGACACCGCCGAGCCCTACTCCGTCTTCCGCAACGAGATCCCCCTCTCCGAGCTCCCTTGCGCCTCATCGGATTCCGCCGCTGCCGATTTCTTCTCCCTTGACGTCGCTGCCGAGGCCTCGCCGCCGGTTGTCGCGGCGGAGGAGCCGAAGACGCCGGCGCTTGCACCGGAGCCGAAGCTCGAGAGCGGTTGGTTCCGCGGGAATTGCAAGTTCAGGAGCCCCATGCTTCAGCTGCACAAAGAGATAGTGGATTTCTGTGGGTTTTTGTCCCCAACTGCAGAAGAGCAAGCTGCACGTGACCTGGCGATAGAATCTGTGTTTGAAGTTATAAAACATATATGGCCTGACTGCCAGGTAGAAGTATTTGGGTCTTTCAGGACAGGGCTGTATCTTCCAACTAGCGATATTGATGTTGTGATTCTGAAGTCAGGCTTGCCAAACCCACAGATTGGCTTGAATGCACTTTCTAGAGCATTGTCACAAAGAGGCATGGCTAAAAGGATACAGGTCATTGGAAAGGCTCGTGTGCCTATTATTAAATTTGTTGAAAAGAAAAGTGGTGTAGCATTTGATGTAAGTTTTGACATTGACAATGGACCCAAAGCTGCTGAGTACATTCAGGAAGCAGTGGCTAAGTGGCCACCACTACGGCCATTGTGTTTGATTTTGAAAGTGTTTTTGCAACAAAGAGAACTAAATGAGGTTTATTCTGGTGGGATTGGTTCTTATGCCCTCCTTACCATGCTGATGGCAGTGTTGCGGAGCCAACCTTCTGCAGAGCACAATTTAGGTGTCCTTCTGGTGCATTTTCTTGATTTCTATGGACGCAAATTGAACACTTCAGATGTTGGTGTGTCATGTAATGGGACAGGAACCTTTTTCTTAAAGAGTAGTAAAGGGTTTCTAAACAAAGCACGACCTTTTCTTATTGGCATTGAGGATCCACAGGCACCAGAGAATGACATCGGAAAGAACTCCTTCAATTATTTCCAGATTAGGTCAGCTTTTTCAATGGCTTACACTACTTTGACCAACCCCAAGGTCATCATGAACCTGGGACCCAACAGTAGCATTCTTGGCACTATAATTAGACCAGATCCTGTATTGTTGGAGCGCAAAGGAGGGTTGAATGGGGATGTAACTTTTAATAGCTTGCTTCCTGGTGCTGGTGAGGCATTACAACAACAATATGGAGATCAGGATATGTTATGCAATTGGCAGTTTGATTATGAAGAAGAACCTCTACCTCGTGGAAATGATTCTAGTGTGGAGCCTAGCGCACGCAGCTCTACAAGGAAGAGGAAATCTGCATCCAAGGAGAAGTCCAGCAAGAAACCAAAGGAAAATGGGGACTATATGGTCAGGAATGAGGAGAATGGCTCATGGAAAGAGAACGGTATAAAGAAGAAACATAGGAGAAAACCATGGTGA 1563 0.4869 MEEELVQEHPPIPETFLYETLSPLSLSASAAAAADGAGRHSPLSDTAEPYSVFRNEIPLSELPCASSDSAAADFFSLDVAAEASPPVVAAEEPKTPALAPEPKLESGWFRGNCKFRSPMLQLHKEIVDFCGFLSPTAEEQAARDLAIESVFEVIKHIWPDCQVEVFGSFRTGLYLPTSDIDVVILKSGLPNPQIGLNALSRALSQRGMAKRIQVIGKARVPIIKFVEKKSGVAFDVSFDIDNGPKAAEYIQEAVAKWPPLRPLCLILKVFLQQRELNEVYSGGIGSYALLTMLMAVLRSQPSAEHNLGVLLVHFLDFYGRKLNTSDVGVSCNGTGTFFLKSSKGFLNKARPFLIGIEDPQAPENDIGKNSFNYFQIRSAFSMAYTTLTNPKVIMNLGPNSSILGTIIRPDPVLLERKGGLNGDVTFNSLLPGAGEALQQQYGDQDMLCNWQFDYEEEPLPRGNDSSVEPSARSSTRKRKSASKEKSSKKPKENGDYMVRNEENGSWKENGIKKKHRRKPW* 521
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod10g1002 520 SUPERFAMILY PAP/OAS1 substrate-binding domain 258 392 - -
Dod10g1002 520 Gene3D Beta Polymerase, domain 2 135 243 IPR043519 -
Dod10g1002 520 Gene3D - 119 389 - -
Dod10g1002 520 Pfam Nucleotidyltransferase domain 149 249 IPR002934 GO:0016779
Dod10g1002 520 PANTHER POLY(A) RNA POLYMERASE 102 490 IPR045862 GO:0004652|GO:0031499|GO:0043631
Dod10g1002 520 PANTHER INACTIVE NON-CANONICAL POLY(A) RNA POLYMERASE PROTEIN TRF4-2-RELATED 102 490 - -
Dod10g1002 520 MobiDBLite consensus disorder prediction 485 509 - -
Dod10g1002 520 CDD NT_PAP_TUTase 142 252 - -
Dod10g1002 520 MobiDBLite consensus disorder prediction 458 520 - -
Dod10g1002 520 Pfam Cid1 family poly A polymerase 306 364 IPR002058 -
Dod10g1002 520 SUPERFAMILY Nucleotidyltransferase 117 270 IPR043519 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod10g1002 K03514 - gmx:100811320 753.436
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod10g1002 10 28082949 28088702 Dod10g1002 10 28082949 28088702 ECH