Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod10g0988 ATGTGTTGTCCTTGGCCTACATGCAGCTGTGACTGGATGAAGATGGAAGGCTCTTCAGGGTCTGCTTGGCAGAGGTCTGATAGCTCAAGGGCATTAAATAGTTCTGGAGTCTCAGACAGGAACCAAAGACTTCATTGTCCTGAAAGGAACCCATTATCCGGCGAGGCATCGCAGGATTCCAGCTTTAGAAAGGAAAGGGAGAGGGTTCATTTTTCACAAGGTGATCATCAGCCTAAAAATCTGGGTGGGTTTTCCAGGTTTTGTGACGATGAAGTAGGGGCAGACCCTTTTGTTTGTTCTATAGAATGGGGTGATATTAGCCTGAGGCAATGGTTAGATAAACCCGATCGTGCAGTAGATGTCTTTGAATGTTTGCACGTATTTAGGCAAATAGTAGAAATTGTTAATGTAGCACATTCTCAGGGAGTCGTAGTTCATAATGTGAGGCCTTCGTGCTTTGTCATGTCGTCTTTCAACCACATCTCGTTTATTGAGTCAGCATCTTGTTCGGATTCCGGCTCGGATTCCTTAGGAGATGGATTGAACAGCCAAGGTGTCGAGGTTAAAACTCCAACATCTCTCTGTCCCCACGATATGCATCAGCAGAGTTTAGGAAGTGAAGATTTCATGCCTGTCAAGACCTCAACAGCTGCATTGTCAGATTCTAGTTGCATGCTGTCAAGTGCTGTGTATGCAGCTCGTGCATCATTGATAGAAGAAACAGAAGAAAATAAAACGAAAGATAGGAGAAAAGCTGAAGAAGTGGAAGGAAAGAAGCAATCATTCCCAATGAAACAGTTACTGCTGATGGAGATGAGTTGGTATACTAGTCCTGAAGAGGTTGCTGGTACTATTAGTTCTTGTGCTTCTGACATTTACCGGTTGGGGGTTCTCCTTTTCGAGCTTTTCTGTCCACTCAGCTCAAGAGAAGAGAAGAGTAGAACCATGGCTAGCCTTAGACATAGAGTTCTTCCTCCACAGTTACTTCTAAAGTGGCCTAAAGAAGCTTCATTTTGCTTATGGTTACTACATCCTGAGCCTAGTAGTCGTCCAACACTCGGGGAGTTGCTGCAGAGTGAGTTCCTTAATGAACAGAGAGATGACATGGAGGAACGTGAAGCAGCAATAGAGCTTAGACACAGAATAGAGGATCAGGAGTTGCTGCTAGAATTCCTTTTGTTAATTCAACAGAAAAAGAAGGAAGTAGCTGAGAAGTTGCAACATACTATCTCTTTTCTGTGTTCAGATATTGAAGAAGTGACCAAGCAGCAATCTAGATTTAAAGAGGTTACTGGCGCTGAACTGGGGAGTGATGATCATTCAGCATCAAGTTTCCCATCCATGACTGTTGATATTGAGGATTCTGCTTGTATAGGGAGCAGAAAACGATTCAGACCAGGGATGGATGTTAAAAACATTGAGGAATGTGATGATAACATAGTTGATGATCAGAAAAATCAGGGAAGTTTTCTTTCGAAAAGTTCACGGCTAATGAAGAACTTTAAGAAACTAGAGTCAGCATACTTCTTAACACGATGCAGACCAGCCTTAGGGAAACCGGTGGTTAGACATTCAACTTTAGCAAATGATGGTAGAGGGTCTGTTGTTGCAACCGAAAGAAGTTGCGTCAACAACTTAGCATCAAAAGAGCAGTGCAGGGAGGGTACAAGTGCTTGGATAAATCCTTTCCTTGAGGGTTTGTGCAAGTACTTATCTTTCAGTAAGCTAAAGGTTAAGGCTGACCTGAAGCAAGGAGATCTTTTGCATTCGTCCAACTTAGTATGCTCACTCAGCTTTGATCGTGATGGAGAATTTTTTGCCACTGCTGGTGTCAATAAGAAGATCAAAGTTTTTGAATGTGATACAATCATAAATGAGGATCGTGATATCCACTATCCAGTAGTGGAGATGGCTAGCAGGTCAAAGTTGAGCAGCATATGTTGGAATACTTACATCAAAGGTCAAATTGCTTCAAGTAACTTTGAAGGTGTTGTACAGTTATGGGATGTGACAAGAAATCAAGTACTGTCTGAAATGAGGGAGCATGAGCGGCGGGTGTGGTCCATTGATTTCTCATCAGCAGACCCTACAATGTTGGCAAGTGGCAGCGATGACGGTTCTGTTAAGCTATGGAGTATCAATCAGGCAATTCCATTTTTGCACTTGGGAGTTAGTGTTGGTACCATCAAGACAAAAGCAAATGTATGCTGCGTTCAGTTCCCTCTGGATTCTGCTCGTTTCCTTGCATTTGGTTCAGCAGATCACCGAATATATTATTATGATCGTCGCAACCTAAAAGTGCCACTCTGTACATTAATTGGACATAATAAGACTGTGAGCTACATTAAGTTTGTAGACACTGTAAACCTTGTCTCTGCTTCCACAGATAACACGTTGAAGCTTTGGGATTTGTCTACTTGTGCGTCACGAGTTATTGACTCCCCTATTCAATCATTCACCGGTCACATGAATGTTAAGAACTTCGTCGGATTGTCAGTATCTGATGGTTATATCGCCACTGGTTCAGAAACAAATGAGGTGTTCGTATACCACAAGGCCTTCCCCATGCCAGCATTGTCATTCAAGTTTCAGAACACTGACCCCCTTTCTGGTCACGAAGTGGATGACGCGGCGCAGTTCGTCTCTTCGGTGTGTTGGCGCAGCCAGTCCTCCACGTTACTTGCTGCAAATTCCACGGGGAATGTCAAAATCTTGGAGATGGTTTGA 2727 0.432 MCCPWPTCSCDWMKMEGSSGSAWQRSDSSRALNSSGVSDRNQRLHCPERNPLSGEASQDSSFRKERERVHFSQGDHQPKNLGGFSRFCDDEVGADPFVCSIEWGDISLRQWLDKPDRAVDVFECLHVFRQIVEIVNVAHSQGVVVHNVRPSCFVMSSFNHISFIESASCSDSGSDSLGDGLNSQGVEVKTPTSLCPHDMHQQSLGSEDFMPVKTSTAALSDSSCMLSSAVYAARASLIEETEENKTKDRRKAEEVEGKKQSFPMKQLLLMEMSWYTSPEEVAGTISSCASDIYRLGVLLFELFCPLSSREEKSRTMASLRHRVLPPQLLLKWPKEASFCLWLLHPEPSSRPTLGELLQSEFLNEQRDDMEEREAAIELRHRIEDQELLLEFLLLIQQKKKEVAEKLQHTISFLCSDIEEVTKQQSRFKEVTGAELGSDDHSASSFPSMTVDIEDSACIGSRKRFRPGMDVKNIEECDDNIVDDQKNQGSFLSKSSRLMKNFKKLESAYFLTRCRPALGKPVVRHSTLANDGRGSVVATERSCVNNLASKEQCREGTSAWINPFLEGLCKYLSFSKLKVKADLKQGDLLHSSNLVCSLSFDRDGEFFATAGVNKKIKVFECDTIINEDRDIHYPVVEMASRSKLSSICWNTYIKGQIASSNFEGVVQLWDVTRNQVLSEMREHERRVWSIDFSSADPTMLASGSDDGSVKLWSINQAIPFLHLGVSVGTIKTKANVCCVQFPLDSARFLAFGSADHRIYYYDRRNLKVPLCTLIGHNKTVSYIKFVDTVNLVSASTDNTLKLWDLSTCASRVIDSPIQSFTGHMNVKNFVGLSVSDGYIATGSETNEVFVYHKAFPMPALSFKFQNTDPLSGHEVDDAAQFVSSVCWRSQSSTLLAANSTGNVKILEMV* 909
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod10g0988 908 Coils Coil 238 258 - -
Dod10g0988 908 MobiDBLite consensus disorder prediction 21 77 - -
Dod10g0988 908 Pfam WD domain, G-beta repeat 589 618 IPR001680 GO:0005515
Dod10g0988 908 Pfam WD domain, G-beta repeat 768 803 IPR001680 GO:0005515
Dod10g0988 908 Pfam WD domain, G-beta repeat 675 712 IPR001680 GO:0005515
Dod10g0988 908 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 772 806 - -
Dod10g0988 908 Coils Coil 359 379 - -
Dod10g0988 908 ProSiteProfiles Trp-Asp (WD) repeats profile. 772 806 IPR001680 GO:0005515
Dod10g0988 908 ProSiteProfiles Protein kinase domain profile. 1 362 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod10g0988 908 ProSitePatterns Trp-Asp (WD) repeats signature. 790 804 IPR019775 -
Dod10g0988 908 Gene3D - 565 908 IPR015943 GO:0005515
Dod10g0988 908 SMART serkin_6 12 362 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod10g0988 908 PANTHER PROTEIN SPA1-RELATED 3 15 908 - -
Dod10g0988 908 ProSiteProfiles Trp-Asp (WD) repeats profile. 679 714 IPR001680 GO:0005515
Dod10g0988 908 SMART WD40_4 722 761 IPR001680 GO:0005515
Dod10g0988 908 SMART WD40_4 630 669 IPR001680 GO:0005515
Dod10g0988 908 SMART WD40_4 765 803 IPR001680 GO:0005515
Dod10g0988 908 SMART WD40_4 672 712 IPR001680 GO:0005515
Dod10g0988 908 SMART WD40_4 812 851 IPR001680 GO:0005515
Dod10g0988 908 SMART WD40_4 584 619 IPR001680 GO:0005515
Dod10g0988 908 SMART WD40_4 862 906 IPR001680 GO:0005515
Dod10g0988 908 PANTHER PROTEIN SPA1-RELATED 2 15 908 IPR044630 GO:0009640
Dod10g0988 908 PRINTS G protein beta WD-40 repeat signature 699 713 IPR020472 -
Dod10g0988 908 PRINTS G protein beta WD-40 repeat signature 656 670 IPR020472 -
Dod10g0988 908 PRINTS G protein beta WD-40 repeat signature 790 804 IPR020472 -
Dod10g0988 908 SUPERFAMILY Protein kinase-like (PK-like) 95 364 IPR011009 -
Dod10g0988 908 MobiDBLite consensus disorder prediction 21 41 - -
Dod10g0988 908 MobiDBLite consensus disorder prediction 59 74 - -
Dod10g0988 908 Gene3D Transferase(Phosphotransferase) domain 1 105 374 - -
Dod10g0988 908 SUPERFAMILY WD40 repeat-like 589 905 IPR036322 GO:0005515
Dod10g0988 908 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 679 714 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod10g0988 Dod-Chr10 27934554 27942910 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod10g0988 665 805 Miscellaneous Gene Families AT5G08390 27.972 2.23e-08 56.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod10g0988 - - gmx:100811457 1573.53
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod10g0988 10 27934554 27942910 Dod10g0988 10 27934554 27942910 ECH