Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod10g0984 ATGGCTGCTGCTGCTGTTGCAACTAGCATTGGAACTGCATGGTGCGTTAGAAGAGCAGCATCTCACGCTTTTGCACTCTCTCATTCTCATTTTCTCCGCATCAATTCCAACCTCTCTTTCCATAGAACCCTTTGCACTCCTCCTCTTTCCGTTTCTACTTCTTCAGCTTCAGGCTCAAGCCAGACAGCACAAGCTTTAAAGGGAGATGTTGATGTATTACTCAACGGAGTGATAGAAAAAAGTGTAACAAAAGAAGTTAAGAATATTCTTGAGATGGCTAGACGGGCATCATTAAGACGAGAGGTTCTTCATACAGATTTTCTAACCCCTCCAGTGGTGAAAGAATCTATGAAAGTATTGGAAAAATTAGCAGACGTGAAAGCAATTGCTCAAGGAGGTTACCCACAGGCTGAACGTTGTCGAATTTCTGTTGGACATCCAGAAGAACTGACAAGTGATCCAGATATCATATCAGCATTGAGCATTACAGGGAACTTTCGGTTTGAACCTTGTTCTCATGGTGACTTCCTTGGGTCTATTCTTGGTACAGGAATTGTCAGGGAGAAACTTGGAGATATTATATTGCAGGGAGAACAGGGTGCTCAGATACTTGTTGTACCAGAACTTGTTGAATTTCTTATATCATCACTAGATAAGGTTCGAAATGTTCCTGTAACTTGCAGCAAGATACCATTAATCTCTCTTGATTATGAGCCGCCAAGAACAACCTCATTTAAAACTGTAGAAGCATCGCTAAGAGTTGATGCCCTAGCTAGTGCAGGGTTCAAGATTTCACGTTCAAAGCTAGTTGACATGATCAGCAACGGCGATGTGCGCATCAACTGGACCCCAGTTACTACCAAAGGAACCACACTCAAGAGTGGAGATATTGTATCGGTTAGTGGAAGGGGTAGATTAAAGATAGGAGAAATAAACTCAACAAGGAAAGGGAAGTTTGCAGTGGAGCTCATTCGGTATTTATAG 984 0.4228 MAAAAVATSIGTAWCVRRAASHAFALSHSHFLRINSNLSFHRTLCTPPLSVSTSSASGSSQTAQALKGDVDVLLNGVIEKSVTKEVKNILEMARRASLRREVLHTDFLTPPVVKESMKVLEKLADVKAIAQGGYPQAERCRISVGHPEELTSDPDIISALSITGNFRFEPCSHGDFLGSILGTGIVREKLGDIILQGEQGAQILVVPELVEFLISSLDKVRNVPVTCSKIPLISLDYEPPRTTSFKTVEASLRVDALASAGFKISRSKLVDMISNGDVRINWTPVTTKGTTLKSGDIVSVSGRGRLKIGEINSTRKGKFAVELIRYL* 328
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod10g0984 327 SUPERFAMILY Alpha-L RNA-binding motif 111 313 - -
Dod10g0984 327 PANTHER RNA-BINDING PROTEIN YLMH-RELATED 60 327 - -
Dod10g0984 327 Gene3D - 153 235 IPR012677 -
Dod10g0984 327 Gene3D - 78 145 - -
Dod10g0984 327 CDD S4 253 307 - -
Dod10g0984 327 SMART s4_6 252 309 IPR002942 GO:0003723
Dod10g0984 327 Gene3D - 246 303 IPR036986 GO:0003723
Dod10g0984 327 Pfam Putative RNA-binding domain in YlmH 158 232 IPR040591 -
Dod10g0984 327 PANTHER RNA-BINDING PROTEIN YLMH-RELATED 60 327 - -
Dod10g0984 327 Pfam S4 domain 256 298 IPR002942 GO:0003723
Dod10g0984 327 TIGRFAM PS_II_S4: photosystem II S4 domain protein 82 325 IPR017506 -
Dod10g0984 327 ProSiteProfiles S4 RNA-binding domain profile. 252 312 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod10g0984 - - gmx:100793767 525.783
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod10g0984 10 27868290 27873484 Dod10g0984 10 27868290 27873484 ECH