Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod10g0979 ATGGCAGCAGCAGCAGCACCTGCAGTTGCTCTGAATGGGGTGAAGGTGTCATCGCAGGCGTACCTGGAAGGGAAGGCAGTGAAGGAGACGAGAGCCCTGATGGCTGAGCTGTGCCGCCACTTCTACAGCCTCGGATGGGTGTCGGGGACAGGTGGCAGCATCACCATCAAGGTCCATGATGACTCCATACCCAAACCTCAACAACTCATACTCATGTCCCCTTCTGGTGTTCAGAAGGAAAGAATGGAACCAGAGGACATGTATGTGTTAACCCAGGATGGATCAATCTTGTCTGCTCCATCTCCCAAGCCTTACCCACACAAGCCTCCCAAGTGCTCCGATTGTGGTCCACTTTTCTTGAAGGCATATCAAATGCGTGATGCTGGGGCTGTCATCCACAGTCATGGGATGGAATCTTGTCTTGCAACAATGATCAATCCTCTATCAAAGGAATTTCGAATCACTCATATGGAAATGATAAAAGGAATCAAGGGGCATGGCTATTATGATGAACTTGTGGTCCCAATAATTGAGAACACGGCCTATGAATATGAGCTCACGGATTCTCTTGCTAAAGCTATTGAAGCCTACCCAAAAACAACAGCAGTGCTTGTTCGCAACCATGGGATTTATATTTGGGGGGACTCATGGATCAGTGCTAAAACTCAGGCTGAATGTTATCATTACCTCTTTGATGCTGCTATTAAACTTCATCAAATGGGATTGGACTGGTCTACTCCAAATCATGGTCCAATACAAAGTGCAAGAAGCAGTCTAAGGATTGCTGGGGAGTCTAATGTGTCAGTTAAGGCAAGGAAAGCTAATGGTGATATTGATCCATACCCACGCTGCATTGTTCTTGACATTGAAGGAACTACTACACCCATATCATTTGTTTCAGAGGTTCTCTTTCCATATGCCCGTGATAATGTTGGAAGGCATCTATCTGCCACATATGATACCCCTGATACTCAAAATGATATCAGGTTGCTTCGCTCCCAAGTTCAAAGTGACCTTGAACAAGGGGTTGCAGGTGCTGTGCCTATTCCCCCTGACGAGGCTGGGAAAGAGGAAGTCATTGCTGCTTTAGTTGCTAATGTGGAGGCTATGATTAAAGCTGATAGAAAGATCACTGCCTTGAAAGAGTTGCAGGGTCATATCTGGCGAACTGGTTATGAGAATAATGAATTGGAGGGAATAATTTTTGATGATGTGCCAGAAGCTTTAGAAAAGTGGCATGCGTTGGGCATAAAGGTATACATATATTCCAGTGGTAGCAGGTTGGCGCAAAGGCTAATATTTGGAAAAACAAACTACGGGGACCTAAGAAAATATTTGTATGGGTTTTTTGACACCACAGTGGGGAACAAAAAGGAGACACGCAGTTATATTGAAATTTCTGAGTCACTTGGCGTTGATAAACCATCAGATATTTTATTTGTCACTGATGTATTTCAGGAAGCTACGGCCGCAAAGGCAGCAGGTTTGGAGGTGATAATTTCTATTCGACCTGGAAATGGACCCCTCCCTGAAAATCATGGGTTCAAGACAATCACAACGTTCTCTGATATCTAA 1575 0.4476 MAAAAAPAVALNGVKVSSQAYLEGKAVKETRALMAELCRHFYSLGWVSGTGGSITIKVHDDSIPKPQQLILMSPSGVQKERMEPEDMYVLTQDGSILSAPSPKPYPHKPPKCSDCGPLFLKAYQMRDAGAVIHSHGMESCLATMINPLSKEFRITHMEMIKGIKGHGYYDELVVPIIENTAYEYELTDSLAKAIEAYPKTTAVLVRNHGIYIWGDSWISAKTQAECYHYLFDAAIKLHQMGLDWSTPNHGPIQSARSSLRIAGESNVSVKARKANGDIDPYPRCIVLDIEGTTTPISFVSEVLFPYARDNVGRHLSATYDTPDTQNDIRLLRSQVQSDLEQGVAGAVPIPPDEAGKEEVIAALVANVEAMIKADRKITALKELQGHIWRTGYENNELEGIIFDDVPEALEKWHALGIKVYIYSSGSRLAQRLIFGKTNYGDLRKYLYGFFDTTVGNKKETRSYIEISESLGVDKPSDILFVTDVFQEATAAKAAGLEVIISIRPGNGPLPENHGFKTITTFSDI* 525
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod10g0979 524 Hamap Probable bifunctional methylthioribulose-1-phosphate dehydratase/enolase-phosphatase E1. 19 524 IPR027505 -
Dod10g0979 524 Pfam Haloacid dehalogenase-like hydrolase 357 499 IPR041492 -
Dod10g0979 524 TIGRFAM salvage_mtnB: methylthioribulose-1-phosphate dehydratase 34 239 IPR017714 GO:0005737|GO:0019509|GO:0046872
Dod10g0979 524 Hamap Enolase-phosphatase E1 [mtnC]. 281 524 IPR023943 GO:0000287|GO:0019509|GO:0043874
Dod10g0979 524 Gene3D - 392 524 IPR023214 -
Dod10g0979 524 PANTHER BIFUNCTIONAL METHYLTHIORIBULOSE-1-PHOSPHATE DEHYDRATASE/ENOLASE-PHOSPHATASE E1-RELATED 8 524 - -
Dod10g0979 524 SUPERFAMILY HAD-like 283 524 IPR036412 -
Dod10g0979 524 SUPERFAMILY AraD/HMP-PK domain-like 28 248 IPR036409 -
Dod10g0979 524 PANTHER METHYLTHIORIBULOSE-1-PHOSPHATE DEHYDRATASE 8 524 IPR017714 GO:0005737|GO:0019509|GO:0046872
Dod10g0979 524 SMART Aldolase_II_2 32 235 IPR001303 -
Dod10g0979 524 Gene3D - 27 251 IPR036409 -
Dod10g0979 524 SFLD enolase-phosphatase 283 523 IPR023943 GO:0000287|GO:0019509|GO:0043874
Dod10g0979 524 TIGRFAM enolase-ppase: 2,3-diketo-5-methylthio-1-phosphopentane phosphatase 283 523 IPR023943 GO:0000287|GO:0019509|GO:0043874
Dod10g0979 524 CDD HAD_EP 284 505 IPR023943 GO:0000287|GO:0019509|GO:0043874
Dod10g0979 524 Pfam Class II Aldolase and Adducin N-terminal domain 33 234 IPR001303 -
Dod10g0979 524 Gene3D - 296 391 - -
Dod10g0979 524 SFLD C1.5: HAD, Beta-PGM, Phosphatase Like 283 523 - -
Dod10g0979 524 Hamap Methylthioribulose-1-phosphate dehydratase [APIP]. 19 243 IPR027514 GO:0005737|GO:0019509|GO:0046872
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod10g0979 K16054 - gmx:100796209 940.258
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod10g0979 10 27830482 27839282 Dod10g0979 10 27830482 27839282 ECH