Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod10g0975 ATGTTGGCAAGTAGCAGTTCCGAGGGCACAGCAGCACCTCTATTAGGGGTAACTGGTGATGGACGTGAACAAGAAGAACAAAACACGACACCCCATCGTGTTGTTGAGGGATGGTGGAACAAAATATTGGACTTGGAGGAAGCCAAGCATCAACTCCTATTCTCACTACCCATGATTCTTACCAACTTGTTCTACTACTTAATCACTTTGGTTTCTGTCATGCTAGCGGGCCACCTTGGTGAGCTTCAGCTTGCTGGTGCCACTCTTGCAAACTCATGGTTCAGTGTCACTGGTGTGGCAGTCATGGTTGGATTAAGTGGGGCATTGGAAACACTCTGTGGGCAAGGATTTGGAGCAAAGGAATACCAAATGTTGGGAATTTATTTACAAGCCTCTTGCATCATATCCCTTATCTTCTCTATCATCGTATCCATTATTTGGTTCTACACAGAACACATCCTAGTGTTGCTTCATCAATCTCATGACATTGCAAGAACAGCAGCACTTTACATGAAGTTCTTTTTCCCAGGCTTATTTGCATATGGCCTCTTGCAAAACATGTTGAGGTTTCTTCAGACACAATCTGTTGTTACACCATTGGTTGTCCTCTCAGTTCTTCCAGTGTTGGTTCACATTGGTATTGCATATGGCTTGGTTCATGGTACAGGTCTAAGTTTTAAGGGTGCTCCAGTGGCAGCTTCAATTTCACTATGGATAGCAACTCTATTGTTGGCCTCGTATGTCTTGTATGCAAAGAAGTTCAAGCAGACATGGGAAGGATTTTCAACCAGGTCATTCCATTATGTATTTACAAACTTGAAACTAGCTCTTCCATCCGCTGCAATGGTATGTTTGGAGTATTGGGCATTTGAAGTTTTGGTTTTCTTAGCTGGACTGTTACCTGACTCACAAATAACTACTTCATTGATTGCAATATGTACAAACACAGAATTCATTGCCTACATGATCACTTATGGTCTAAGTGCTGCTGCAAGCACAAGGGTTTCCAATGAATTGGGAGCAGGCCACCCAGATCGAGCTAAGCATGCAATGGGGGTTACTCTCAAGCTCTCTCTTCTCCTTGGTTTATGTTTTGTTTTGGCACTTGTGTTTGGTCATGATATTTGGATCCAAATGTTCAGTAGTAGTCCCATAATCAAAAAGGAGTTTGCTTCAATAACACCCTTACTTGCAATATCAATACTACTAGATGCTATCCAAGGTGTCTTATCAGGGGTGGCTAGAGGATGTGGTTGGCAGCACTTAGCTGCTTATGTCAACCTTGCAACATTTTATCTAATTGGTTTACCAATATCATGCCTACTAGGATTTAAGACCAATTTGCAATTCAAGGGTTTATGGATTGGCTTGATTTGTGGGCTGGTTTGTCAAACTGCAGCTCTCTTATTTTTCACATGGCGTGCCAAATGGACCAAACTAAATCTCCCTGGGGATAAGGACCATCCAATTGTTGTTTAA 1479 0.4226 MLASSSSEGTAAPLLGVTGDGREQEEQNTTPHRVVEGWWNKILDLEEAKHQLLFSLPMILTNLFYYLITLVSVMLAGHLGELQLAGATLANSWFSVTGVAVMVGLSGALETLCGQGFGAKEYQMLGIYLQASCIISLIFSIIVSIIWFYTEHILVLLHQSHDIARTAALYMKFFFPGLFAYGLLQNMLRFLQTQSVVTPLVVLSVLPVLVHIGIAYGLVHGTGLSFKGAPVAASISLWIATLLLASYVLYAKKFKQTWEGFSTRSFHYVFTNLKLALPSAAMVCLEYWAFEVLVFLAGLLPDSQITTSLIAICTNTEFIAYMITYGLSAAASTRVSNELGAGHPDRAKHAMGVTLKLSLLLGLCFVLALVFGHDIWIQMFSSSPIIKKEFASITPLLAISILLDAIQGVLSGVARGCGWQHLAAYVNLATFYLIGLPISCLLGFKTNLQFKGLWIGLICGLVCQTAALLFFTWRAKWTKLNLPGDKDHPIVV* 493
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod10g0975 492 CDD MATE_eukaryotic 47 479 IPR045069 GO:0042910|GO:1990961
Dod10g0975 492 MobiDBLite consensus disorder prediction 1 30 - -
Dod10g0975 492 Pfam MatE 278 439 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Dod10g0975 492 Pfam MatE 57 216 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Dod10g0975 492 PANTHER MULTIDRUG RESISTANCE PROTEIN 26 480 - -
Dod10g0975 492 PANTHER PROTEIN DETOXIFICATION 26 480 - -
Dod10g0975 492 TIGRFAM matE: MATE efflux family protein 57 454 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod10g0975 Dod-Chr10 27784614 27789915 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod10g0975 K03327 - gmx:100816310 759.599
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod10g0975 10 27784614 27789915 Dod10g0975 10 27784614 27789915 ECH