Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod10g0938 ATGGCGGACTTTGACACTTCTCATAATCAACGTGTAGAAGAAAATGAATTTGTTAATGGTGTCTGTAGATGGCTTGAGAGAGCCAGGGGTTCTCGACCTGCATCTGGTGATGCTGGCCCCCACACAGTGAAGTTTTTAAGAGATTTCCACTTGGAAACAAAGAGGGAACATGATCTCCTGGATGTGGGGGGTCAAAGTGAAGAAGATGCTGAGGGCGTTGAGAATGGTAGATGGACTTCCATCAAGGCAGTGCTGTTGCTACTACTGGGAACTGTTATTGCTGCTGCATTTGCTGATCCTCTGGTTGATGCAGTCGATAACTTCTCTGAAGCTACAAGCATTCCTGCTTTCTTCATTTCTTTTATTGGTCTGCCTTTGGCAACCAACTCAAGTGAAGCAGTGTCGGCAATAATATTTGCTAGTCGCGATAAGAGGCAAACTGCCTCATTAACATTTTCAGAGCTATATGGGGCAGTGACAATGAATAATGTGCTTTGCTTATCAGTATTCTTAGCCTTGGTCTATGTGAGGGGATTGACGTGGGATTTCTCCTCAGAAGTGCTGGTTATTCTGGTGGTTTGCATTGTCATGGGTGCTCTTGGGAGTTTCCGCACTTCTTTCCCTCTATGGACATCACTAGTGGCCATCCTGCTCTATCCTTTCTCCCTTGCATTGGTCTATGTTCTTGATTACATATTTGGTTGGTCATAG 711 0.4487 MADFDTSHNQRVEENEFVNGVCRWLERARGSRPASGDAGPHTVKFLRDFHLETKREHDLLDVGGQSEEDAEGVENGRWTSIKAVLLLLLGTVIAAAFADPLVDAVDNFSEATSIPAFFISFIGLPLATNSSEAVSAIIFASRDKRQTASLTFSELYGAVTMNNVLCLSVFLALVYVRGLTWDFSSEVLVILVVCIVMGALGSFRTSFPLWTSLVAILLYPFSLALVYVLDYIFGWS* 237
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod10g0938 236 ProSitePatterns EF-hand calcium-binding domain. 5 17 IPR018247 -
Dod10g0938 236 PANTHER VACUOLAR CALCIUM ION TRANSPORTER 39 233 IPR004713 GO:0006812|GO:0008324|GO:0016021
Dod10g0938 236 PANTHER SODIUM/CALCIUM EXCHANGER NCL 39 233 - -
Dod10g0938 236 Pfam Sodium/calcium exchanger protein 83 227 IPR004837 GO:0016021|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod10g0938 Dod-Chr10 27289803 27291090 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod10g0938 1 236 EF-hand Containing Proteins AT1G53210 67.227 1.54e-100 302
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod10g0938 - - adu:107459761 416.772
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod10g0938 10 27289803 27291090 Dod10g0938 10 27289803 27291090 ECH