Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod10g0909 ATGGCTTCTCTGCCCCTCCCCAAAACCACCCTTCTCACATTCTTGTTCTTATCCATCTCCACCATCATTTCTCATGCTCTTGTTCCCAAAAACGAGACCTTCAAGTATGTCAACTCAGGTGAACTTGGCCCTTATATTGTAGAGTATGGTGCTGATTACCGAATGATAAGCATCTTCAACTCTCCTTTCCAAGTTGGTTTCTACAACACCACCCCAAATGCCTTCACTCTAGCACTCCGTGTTGGTCTCCAACGATCGGAACAACTGTTTCGTTGGGTTTGGGAGGCCAATAGGGGCAACCCAGTTGGTGAAGGTGCCACTTTTTCACTTGGTGTTGATGGGAACCTTGTGCTGGCTGATGCAAATGGTAGAACTGCATGGCAAACGAACACAACAAATAAAGGTGTTGTGGCCTTTAGGTTGCTCCCAAATGGTAACATGGTGCTTCTTGATTCCAAGGGGAGATTTGTTTGGCAAAGTTTTGACCACCCTACGGATACCCTTTTGGTGGGTCAGTCCTTAAGAGCTGAAGGGCCATCTAAGTTGGTTAGTAGGCTTTCAGAAAAGGAAAATGTTAATGGGCCTTATAGTTTAGTGTTGGAGCCCAAAGGGTTGGCCCTTTACTACAAGAGCATGAATTCTCCCAGGCCCGTTCTCTATGGTCTCCTTTCAGCTCAAAATTGGTTCTTCATTGAAAAAGGGTCATTGCAAAATGTCACACTCATATCTGAGTCAGATAGTTTTGAGATTGATTTTAGTTACCATGTGGCTAATCCTTCCAACTTTGGCACTAGGGTCATTGCTATGCCGGTGAACAATAGCACCTTAACATATCTTAGGCTTGGAATTGATGGTAACATTAGGCTCCACACTTATTTCCTTGATGTGCGTGATGGTGTTTGGGAAGTGACATACACCTTGTTTGAAAGAGATTCCAATGATGAAAGTGAGTGCCAATTGCCAGAGAGGTGTGGGAAATTTGGGCTTTGTGAGGACAACCAATGTGTTGGTTGCCCATTGGAGAGTGGGATATTTGGATGGAGCAAAAATTGCACTGCAAAGCCTGTGACTTCATGCAAGCCAAGTGATTTCCACTACTACAAACTTGAAGGTGTTGAGCATTACATGGGCAAGTACACTACAGGGGATAGGGTGAGTGAAAACAATTGTGGGAACAAATGTACCAATGATTGCAAGTGTGTTGGGTATTTCTACCATGGGGATGACTCAAGGTGTTGGATAGCTTATGATCTACAAACCCTTACTAGAGTGGCAAATTCCACACATGTGGGCTATGTTAAGGTGCCTAATTAA 1314 0.4414 MASLPLPKTTLLTFLFLSISTIISHALVPKNETFKYVNSGELGPYIVEYGADYRMISIFNSPFQVGFYNTTPNAFTLALRVGLQRSEQLFRWVWEANRGNPVGEGATFSLGVDGNLVLADANGRTAWQTNTTNKGVVAFRLLPNGNMVLLDSKGRFVWQSFDHPTDTLLVGQSLRAEGPSKLVSRLSEKENVNGPYSLVLEPKGLALYYKSMNSPRPVLYGLLSAQNWFFIEKGSLQNVTLISESDSFEIDFSYHVANPSNFGTRVIAMPVNNSTLTYLRLGIDGNIRLHTYFLDVRDGVWEVTYTLFERDSNDESECQLPERCGKFGLCEDNQCVGCPLESGIFGWSKNCTAKPVTSCKPSDFHYYKLEGVEHYMGKYTTGDRVSENNCGNKCTNDCKCVGYFYHGDDSRCWIAYDLQTLTRVANSTHVGYVKVPN* 438
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod10g0909 437 Gene3D - 83 216 IPR036426 -
Dod10g0909 437 SUPERFAMILY alpha-D-mannose-specific plant lectins 73 211 IPR036426 -
Dod10g0909 437 Pfam D-mannose binding lectin 93 178 IPR001480 -
Dod10g0909 437 SMART blect_4 47 164 IPR001480 -
Dod10g0909 437 CDD PAN_AP_plant 358 436 - -
Dod10g0909 437 PIRSF SLG 1 437 IPR035446 -
Dod10g0909 437 ProSiteProfiles Bulb-type lectin domain profile. 31 162 IPR001480 -
Dod10g0909 437 PANTHER - 15 437 - -
Dod10g0909 437 PANTHER SECRETED GLYCOPROTEIN EP1, PUTATIVE-RELATED 15 437 - -
Dod10g0909 437 CDD B_lectin 47 164 IPR001480 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod10g0909 Dod-Chr10 26904369 26905682 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod10g0909 - - gmx:100804561 736.873
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod10g0909 10 26904369 26905682 Dod10g0909 10 26904369 26905682 ECH