Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod10g0906 ATGGATGATGCGCCAGGCAGGAAGCCTTGGAAAGCCTTCAGGCCTGATGGAGTAATCATTTTCTCCGATATCCTTACACCTCTGCCTGCATTCGGGGTTGAATTTGACATAGAAGAAGTAAGGGGGCCTGTTATTCAGTCACCTATACGCTCGGAGGAGGGATTAAAGACTCTGCATCCAATCGACCTGGACAAGCTTAGCTTTGTTGGAGAATCGCTTAAGATATTGCGCCAGGAGGTTGGTGGTCATGCTGCTGTTTTGGGGTTTGTGGGAGCACCTTGGACAATTGCAACATACATAGTGGAAGGGGGTACAACACGCACATATACAACCATTAAGAGCATGTGCCATACAGCACCACATGTATTGAGGACTTTGCTTTCTCATTTGACGCAGGCCATAGCAGATTACATTGTTTTCCAAGTGGAGTCTGGGGCTCACTGCATACAAATATTTGATTCATGGGGTGGACAGTTACCACCTGATATGTGGGAACGCTGGTCAAAGCCTTATATCAAAGAGATTGTAGATTTGGTCAAGAAAAAATGCCCCGAGACCCCAATTGTTCTCTACATAAATGGAAATGGTGGCCTTCTTGAGCGTATGAAAGAAACTGGTGTTGATGTTATTGGCCTAGACTGGACAGTGGATATGGCAGATGGAAGAAGAAGATTGGGTAGTGGGATAGGTGTGCAGGGAAATGTGGACCCTGCCTATTTGTTCTGCCCTCTTCCTGCCCTCACTGAAGAAATTCAGAGGGTTGTGAGGTGTGCGGGACCAAGACAGCACATCCTAAATCTTGGGCATGGTGTTCTTGTTGGCACACCTGAAGAAGCTGTCGCACATTTCTTTGAAGTAGCGAGAAGCTTGAAGTTTGATTCATTTTTTCAAAATAAAGAAGACCCTACACTCGTCGTTTGA 921 0.4604 MDDAPGRKPWKAFRPDGVIIFSDILTPLPAFGVEFDIEEVRGPVIQSPIRSEEGLKTLHPIDLDKLSFVGESLKILRQEVGGHAAVLGFVGAPWTIATYIVEGGTTRTYTTIKSMCHTAPHVLRTLLSHLTQAIADYIVFQVESGAHCIQIFDSWGGQLPPDMWERWSKPYIKEIVDLVKKKCPETPIVLYINGNGGLLERMKETGVDVIGLDWTVDMADGRRRLGSGIGVQGNVDPAYLFCPLPALTEEIQRVVRCAGPRQHILNLGHGVLVGTPEEAVAHFFEVARSLKFDSFFQNKEDPTLVV* 307
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod10g0906 306 TIGRFAM hemE: uroporphyrinogen decarboxylase 8 288 IPR006361 GO:0004853|GO:0006779
Dod10g0906 306 CDD URO-D 9 289 IPR006361 GO:0004853|GO:0006779
Dod10g0906 306 Pfam Uroporphyrinogen decarboxylase (URO-D) 8 289 IPR000257 GO:0004853|GO:0006779
Dod10g0906 306 PANTHER UROPORPHYRINOGEN DECARBOXYLASE 1, CHLOROPLASTIC 8 300 - -
Dod10g0906 306 ProSitePatterns Uroporphyrinogen decarboxylase signature 2. 87 103 IPR000257 GO:0004853|GO:0006779
Dod10g0906 306 PANTHER METHYLTETRAHYDROFOLATE:HOMOCYSTEINE METHYLTRANSFERASE RELATED 8 300 - -
Dod10g0906 306 SUPERFAMILY UROD/MetE-like 8 290 IPR038071 -
Dod10g0906 306 Gene3D - 6 292 IPR038071 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod10g0906 Dod-Chr10 26832463 26834546 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod10g0906 K01599 - gmx:100807032 564.303
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod10g0906 10 26832463 26834546 Dod10g0906 10 26832463 26834546 ECH