Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod10g0892 ATGGGAGGCGGGTTTAGAGTGCTTCACTTAGTCAGACCATTTCTCTCGTTCCTTCCTGAAGTTCAGACTGCTGACAGGAAAGTGCCATTTAGAGAGAAGGTCATATATACTGTGATCTCTCTTTTCATTTTCCTGGTTTGTAGTCAGCTCCCTCTGTACGGAATTCACTCAACAACAGGTGCAGATCCATTCTATTGGATGCGTGTTATCCTTGCTTCCAACCGTGGAACTGTCATGGAGCTTGGAATCACCCCCATTGTGACTTCTGGGCTGGTGATGCAACTTCTAGCTGGGTCAAAGATCATTGAAGTAGACAACAATGTTCGAGAGGATCGGGCCCTCTTAAATGGCGCACAAAAGCTACTTGGTATCTTGATAGCTGTTGGAGAGGCAGTCGCCTATGTTCTGTCTGGGATGTATGGTAGTGTGGGGCAACTTGGAGTGGGAAATGCCATCCTCATCATCATCCAGCTCTGTTTTGCGGGTATAATTGTGATATGCTTAGATGAGCTTCTTCAAAAAGGATATGGTCTTGGGTCTGGAATTTCCCTATTCATAGCAACTAATATCTGTGAAAATATTATATGGAAAGCATTTAGTCCCACCACCATTAACAGTGGACGTGGAGCTGAATTTGAGGGAGCTGTTATTGCTTTGTTCCATTTGTTGATTACTAGAACAGATAAGGTCCGTGCTCTTCGTGAGGCATTTTACAGGCAGAATCTTCCCAATGTGACAAATCTACTTGCTACCGTCTTGATTTTCCTAATTGTGATATACTTCCAAGGATTCCGGGTGGTGTTGCCTGTAAGGTCAAAAAATGCCCGTGGACAGCAGGGTTCATACCCAATCAAACTGTTTTATACCTCCAACATGCCCATTATTCTCCAGTCTGCCCTTGTTTCGAATCTGTACTTCATCTCCCAGCTACTCCACCGCAAGTACAGTGGAAACTTTTTTGTGAATCTGTTGGGGAAATGGAAGGAATCTGAATATGGAGGTGGTCAGTCTATTCCAGTTGGTGGTATTGCATACTACATCACCGCACCATCCAGGTAA 1059 0.4438 MGGGFRVLHLVRPFLSFLPEVQTADRKVPFREKVIYTVISLFIFLVCSQLPLYGIHSTTGADPFYWMRVILASNRGTVMELGITPIVTSGLVMQLLAGSKIIEVDNNVREDRALLNGAQKLLGILIAVGEAVAYVLSGMYGSVGQLGVGNAILIIIQLCFAGIIVICLDELLQKGYGLGSGISLFIATNICENIIWKAFSPTTINSGRGAEFEGAVIALFHLLITRTDKVRALREAFYRQNLPNVTNLLATVLIFLIVIYFQGFRVVLPVRSKNARGQQGSYPIKLFYTSNMPIILQSALVSNLYFISQLLHRKYSGNFFVNLLGKWKESEYGGGQSIPVGGIAYYITAPSR* 353
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod10g0892 352 Pfam SecY 77 317 IPR002208 GO:0015031|GO:0016020
Dod10g0892 352 PANTHER SECY/SEC61-ALPHA FAMILY MEMBER 1 351 IPR002208 GO:0015031|GO:0016020
Dod10g0892 352 ProSitePatterns Protein secY signature 1. 77 96 IPR030659 -
Dod10g0892 352 PANTHER F9K20.24 PROTEIN 1 351 - -
Dod10g0892 352 SUPERFAMILY Preprotein translocase SecY subunit 10 350 IPR023201 -
Dod10g0892 352 Pfam Plug domain of Sec61p 42 76 IPR019561 -
Dod10g0892 352 Gene3D SecY subunit domain 9 352 IPR023201 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod10g0892 Dod-Chr10 26638155 26642373 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod10g0892 1 351 Miscellaneous Gene Families AT2G34250 93.447 0.0 663
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod10g0892 K10956 - gmx:100798372 686.797
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod10g0892 10 26638155 26642373 Dod10g0892 10 26638155 26642373 ECH