Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod10g0887 ATGCCAAAAAACGACGCCGTTTGGGTCTTCACCCTCATCGCCGTCTTCCGATCCGTCCTCCCCTCCTCCGCCGCCGCCAACGCCGACTCATCAGCGATCCTCCTCCCTAGTCAACTCGGCCGCGACACGCGGAACTCGTCGCGGTTGAGTTGCCCCGCCCCCAACCCCAACCTCTACTACCGGCCTGTCATCGGAATCCTAAGCCACCCCGGCGACGGCGCCTCCGGCCGCCTCAACAACGCCACCGGAGTATCGTACATCGCGGCGTCATACGTGAAGTTCGTGGAGGCCGCCGGCGCCCGAGTCATTCCCCTGGTCTATAACGAGCCACCAGAGAAGCTTCTCAAGAAGCTCAAATTCGTAAATGGGGTTCTCTTCACTGGTGGATCTGCTAAAAGTGGTTTATATTTTGAAACTGTTGGGAGAATATTCAAGAAAGTTTTGGAGAAAAACGATGGTGTAGAGTATTTCCCATTATATGCTGTTTGCTTAGGATTTGAACTTTTAACAATGATCATTAGCAAGGACAATAATATTCTTGAAGAATTTAGTGCATTAAATCAGGCAAGTACTCTTCAATTTGTGGAGAATGCAAATATTGAAGGAACTGTATTTCAGAGATTTCCTCCAGACTTGCTAGGGAAATTGAACACAGACTGTCTTGTCATGCAAAATCACCATTATGGCATATCCCCAGGAAAGTTTCTGGATAATCACAAGTTATCTACTTTTTTTGAGATCCTGACAACTTGCAAGGATGAGGATGATAAGGTTTATGTTTCCACAGTAAGATCACGGAACTATCCTGTGACTGGCTTCCAGTGGCATCCAGAGAAAAACACTTTTGAATGGGGTTTACCAGGAATTCCGCACACGGAGGATGCCATTCAGGTCACTCAGTATGTTGCAAACTTTCTGGTCAGTGAAGCTAGGAAATCATTAAACAGACCAGATGCTCAAGAAGTGCTAGACAATCTCATTTACAATTACAGTCCCACTTATGCTGGGAAGGCTGGGAGAGGATTTGATGAAGTCTATATATTCTCATGA 1050 0.4686 MPKNDAVWVFTLIAVFRSVLPSSAAANADSSAILLPSQLGRDTRNSSRLSCPAPNPNLYYRPVIGILSHPGDGASGRLNNATGVSYIAASYVKFVEAAGARVIPLVYNEPPEKLLKKLKFVNGVLFTGGSAKSGLYFETVGRIFKKVLEKNDGVEYFPLYAVCLGFELLTMIISKDNNILEEFSALNQASTLQFVENANIEGTVFQRFPPDLLGKLNTDCLVMQNHHYGISPGKFLDNHKLSTFFEILTTCKDEDDKVYVSTVRSRNYPVTGFQWHPEKNTFEWGLPGIPHTEDAIQVTQYVANFLVSEARKSLNRPDAQEVLDNLIYNYSPTYAGKAGRGFDEVYIFS* 350
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod10g0887 349 PANTHER PROTEASE FAMILY C26 GAMMA-GLUTAMYL HYDROLASE 24 348 IPR015527 GO:0008242
Dod10g0887 349 Gene3D - 59 349 IPR029062 -
Dod10g0887 349 ProSiteProfiles Gamma-glutamyl hydrolase domain profile. 53 349 IPR015527 GO:0008242
Dod10g0887 349 SUPERFAMILY Class I glutamine amidotransferase-like 62 346 IPR029062 -
Dod10g0887 349 ProSiteProfiles Glutamine amidotransferase type 1 domain profile. 77 315 - -
Dod10g0887 349 Pfam Peptidase C26 62 278 IPR011697 GO:0016787
Dod10g0887 349 PANTHER GAMMA-GLUTAMYL HYDROLASE 1 24 348 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod10g0887 Dod-Chr10 26564837 26573487 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod10g0887 K01307 - gmx:100796947 546.969
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod10g0887 10 26564837 26573487 Dod10g0887 10 26564837 26573487 ECH