Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod10g0826 ATGGCTAAAGTTGCTGCTATTCTTTTTCTTATGTTCTTGTCCATCACTTCAGGTGGGAATGTGATCAAGGTTAATGGGCAGAAAACTTGGTGTGTGGCTAAGCCTTCATCAGACCAGGCTATCCTTTTGGCCAACCTCAACTATGCATGCTCTCAAGTTGATTGCAAGATTCTGCAGAAAGGTTGCCCCTGCTTTTCCCCTGACAATCTCATGAACCATGCCTCCATTGCCATGAACCTCTATTATCAGTCTAGGGGAAGAAACCACTGGAATTGTGACTTCAGGGCCTCTGGCCTCATTGTTGTGACCGATCCTACTTCTGGGCTTGGCTCAGAAGTCATAATGATGTCTGTGACAAGAGGAACTCAAGCAATTCAAGGACTTCCAACAGGATTGGACTTGAAGAGTTATTCAGAAACCCCAATATCTCCATCAAAGTTATTTGAAGTGGTTGCTGATGACCTTTTAACACTCAACAAAAATCTTCAGTCGATTGTAGGTGCAGAAAATCCAGTTCTAATGTCTGCAGCTGAGCAGATCTTTAGTGCTGGTGGGAAGAGGATGAGACCAGCTCTGGTGTTTTTGGTGTCAAGGGCAACGGCAGAGCTACTTGGCTTGAAGGACCTTACTGTAAAGCATCGACGTTTAGCAGAGATTATTGAAATGATTCATACTGCAAGTTTGATACATGATGATGTACTAGATGAGAGTGACCTACGACGAGGTAGGAAAACTGTTCATCAAATGTTTGGAACAAGAGTGGCAGTTTTGGCTGGAGACTTCATGTTTGCACAGTCATCTTGGTATCTAGCCAATCTTGAAAATATTGAAGTCATCAAACTCATCAGCCAGGTGATTAAAGATTTCGCAAGTGGTGAAATAAAGCAGGCTTCTAGCTTATTTGATTGTGATGTTGAACTCGATGAGTATCTAATTAAGAGCTACTATAAGACTGCCTCCTTGATTGCTGCCAGTACGAAAGGAGCTGCAATTTTTAGTGGCGCCGATGGAAGCATCGCTGAGAGAATGTATGAATACGGAAGGAATCTTGGTCTATCCTTCCAAGTAGTGGATGACATATTGGATTTCACACAATCGGCAGAGCAATTGGGAAAGCCTGCTGGCACTGACCTGGCCAAAGGTAACCTGACTGCACCAGTGATTTTCGCATTGGAGAAAGAACCGAAGTTGAGGGACATCATTGAATCCGAATTTAGTCAGACCGGGTCCCTTGATGAGGCCATCAAGATGGTCAAGAGTAGTGGGGGCATCGAAAGGGCACAAGAGTTGGCCAAAGAGAAAGCTGATCTTGCTATTCAAAGTCTTCAATGTCTTCCTCAGAGTGTGTTTCGTTTAGCTCTCGAGGATATGGTGGCATATAATCTTCAACGGATTGCATAA 1401 0.4383 MAKVAAILFLMFLSITSGGNVIKVNGQKTWCVAKPSSDQAILLANLNYACSQVDCKILQKGCPCFSPDNLMNHASIAMNLYYQSRGRNHWNCDFRASGLIVVTDPTSGLGSEVIMMSVTRGTQAIQGLPTGLDLKSYSETPISPSKLFEVVADDLLTLNKNLQSIVGAENPVLMSAAEQIFSAGGKRMRPALVFLVSRATAELLGLKDLTVKHRRLAEIIEMIHTASLIHDDVLDESDLRRGRKTVHQMFGTRVAVLAGDFMFAQSSWYLANLENIEVIKLISQVIKDFASGEIKQASSLFDCDVELDEYLIKSYYKTASLIAASTKGAAIFSGADGSIAERMYEYGRNLGLSFQVVDDILDFTQSAEQLGKPAGTDLAKGNLTAPVIFALEKEPKLRDIIESEFSQTGSLDEAIKMVKSSGGIERAQELAKEKADLAIQSLQCLPQSVFRLALEDMVAYNLQRIA* 467
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod10g0826 466 PANTHER GERANYLGERANYL PYROPHOSPHATE SYNTHASE 129 465 - -
Dod10g0826 466 TIGRFAM prenyl_cyano: solanesyl diphosphate synthase 143 465 - -
Dod10g0826 466 CDD Trans_IPPS_HT 168 464 IPR000092 GO:0008299
Dod10g0826 466 ProSitePatterns Polyprenyl synthases signature 1. 228 242 IPR033749 -
Dod10g0826 466 SUPERFAMILY Terpenoid synthases 146 464 IPR008949 -
Dod10g0826 466 Gene3D Farnesyl Diphosphate Synthase 143 465 IPR008949 -
Dod10g0826 466 Pfam Polyprenyl synthetase 172 417 IPR000092 GO:0008299
Dod10g0826 466 SFLD Isoprenoid Synthase Type I 176 459 - -
Dod10g0826 466 PANTHER SOLANESYL DIPHOSPHATE SYNTHASE 2, CHLOROPLASTIC 129 465 - -
Dod10g0826 466 ProSitePatterns Polyprenyl synthases signature 2. 350 362 IPR033749 -
Dod10g0826 466 SMART X8_cls 29 111 IPR012946 -
Dod10g0826 466 Pfam X8 domain 29 97 IPR012946 -
Dod10g0826 466 Gene3D - 24 123 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod10g0826 Dod-Chr10 23822018 23831330 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod10g0826 30 108 Glycoside Hydrolase AT3G55430 43.750 8.40e-17 80.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod10g0826 K05356 - gmx:100805842 624.78
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod10g0826 10 23822018 23831330 Dod10g0826 10 23822018 23831330 ECH