Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod09g2544 ATGAGTGGAGCCGTTCTTGTCGCCGTTGCTGCTGCCATCGGTAACTTACTGCAAGGATGGGATAATGCCACTATTGCAGGATCTATTTTGTACATAAAGAGGGAGTTCAAATTAGAAAGCGAACCCACAGTAGAAGGTCTAATCGTGGCCATGTCTCTAATCGGAGCCACCGTGGTCACTACGTTCTCTGGAGCCCTATCAGACTTGCTAGGTCGACGTCCTATGTTGATTGTCTCCTCTGTCCTTTATTTTGTTGGTTCTCTTGTGATGCTATGGTCTCCAAATGTTTATATCCTCCTCTTTGCAAGACTTTTGGATGGTTTGGGGATCGGTTTGGCAGTTACCTTGGTGCCTCTTTACATATCTGAGACAGCTCCTCCTGAGATTAGGGGATTACTCAATACACTTCCGCAGTTCACTGGTTCAGCTGGAATGTTCTTCTCCTACTGTATGGTCTTCGGAATGTCATTCATGAAGGCCCCAAGCTGGAGAATCATGTTGGGTGTTCTTACAATTCCCTCCCTCATTTATTTTGCTCTCGCACTACTCTTCTTGCCTGAGTCTCCAAGATGGCTTGTTAGTAAAGGCCGTATGCTTGAGGCCAAGAAGGTTTTGCAGCGCCTTCGCGGAAGGGAAGATGTTTCTGGTGAGATGGCTTTACTGGTTGAGGGTCTTGGAGTTGGGGGTGATACAGCCATCAAAGAGTACATAATTGGTCCAGCCAACGAATTCGCAGATGAAGAGGATCCATCTACAGGTAATGATCAGATCAAGTTGTATGGGCCTGAACAAGGTCAGTCCTGGGTTGCTAGACCTGTCACTGTACATAGTTCCATTGGCCTTGTATCTCGGAAAGGAAGCATGGCAAATCAGAGTGGTCTAGTGGACCCCCTGGTGACCCTCTTTGGTAGCGTCCATGAGAAGCTTCCGGAAACAGGAAGTATGCGAAGTGCCCTTTTTCCACACTTTGGGAGTATGTTTAGTGTTGGCGGAAATCAGCCTAGGAATGAAGATTGGGATGAAGAAAGCCTTGCGAGAGAGGGTGATGATTATGTGTCTGATGCGGCTGCTGGTGATTCCGATGATAATTTGCAGAGTCCATTGATCTCCCGTCAAGCAACAAGTCTAGATAAAGACATGCCACTTCCTGCTCATGGTAGCCTTTCAAGCATGAGACAGGGTAGTCTTCTACATGGAAATGCAGGAGAACCTGCTGGTAGTACTGGAATTGGTGGTGGTTGGCAGCTAGCATGGAAATGGTCTGAACAAGGATGCCCAGATGGAAAGAAGGAAGGTGGTTTTAAGAGAATATATTTACATCAAGAGGGTGGTCTTGGAGCTAAACGTGGGTCTGTGGTTTCACTTCCTGGTGGTGATGTGCCAGCAGATGGTGAGGTTGTCCAGGCTGCTGCTCTGGTGAGTCAGCCAGCGCTTTATAACAAGGAGCTTATGCATCAGCAGCCAGTTGGACCTGCAATGATTCATCCATCTGAAGCAGCTGCAAAAGGACCAACTTGGAGTGATCTTTTTGAACCTGGGGTGAAGCATGCTTTGATTGTGGGGATGGGGATTCAGATTCTTCAGCAGTTCTCTGGTATAAATGGGGTCCTCTATTATACCCCTCAAATTCTTGAGCAGGCAGGTGTTGGTTATCTTCTTTCAAATCTGGGCCTTGGTTCTACTTCTTCATCTTTTCTTGTTAGCGCTTTGACCACCTTGTTGATGCTTCCGTGTATAGCTGTTGCCATGAGGCTTATGGATATTTCTGGCAGAAGGACTTTGCTTCTCAGTACAATCCCCATCTTGATAGTATCTCTTCTCATATTAGTACTGGGGAGCCTTGTGGATTTGGGCAGCACTGCGAATGCATCAATCTCAACCATCAGTGTTGTTGTTTACTTCTGTTGCTTTGTCATGGGATTTGGGCCAATTCCTAATATACTTTGTGCAGAGATCTTTCCCACTCGAGTTCGTGGTCTCTGCATTGCCATATGCGCTCTTACCTTTTGGATTGGTGACATCATTGTCACCTACACACTGCCAGTTATGCTTAATTCTGTAGGCCTCGCTGGTGTTTTTGGCATGTATGCAGTCGTGTGCTTCATCGCTTGGGTGTTTGTCTTCTTGAAAGTTCCAGAAACCAAGGGCATGCCACTGGAAGTGATCATTGAGTTCTTCTCTGTCGGAGCAAGGCAGGTGGACGCTGCTCAGCATAACTCAGGGGTATGGTAA 2232 0.4691 MSGAVLVAVAAAIGNLLQGWDNATIAGSILYIKREFKLESEPTVEGLIVAMSLIGATVVTTFSGALSDLLGRRPMLIVSSVLYFVGSLVMLWSPNVYILLFARLLDGLGIGLAVTLVPLYISETAPPEIRGLLNTLPQFTGSAGMFFSYCMVFGMSFMKAPSWRIMLGVLTIPSLIYFALALLFLPESPRWLVSKGRMLEAKKVLQRLRGREDVSGEMALLVEGLGVGGDTAIKEYIIGPANEFADEEDPSTGNDQIKLYGPEQGQSWVARPVTVHSSIGLVSRKGSMANQSGLVDPLVTLFGSVHEKLPETGSMRSALFPHFGSMFSVGGNQPRNEDWDEESLAREGDDYVSDAAAGDSDDNLQSPLISRQATSLDKDMPLPAHGSLSSMRQGSLLHGNAGEPAGSTGIGGGWQLAWKWSEQGCPDGKKEGGFKRIYLHQEGGLGAKRGSVVSLPGGDVPADGEVVQAAALVSQPALYNKELMHQQPVGPAMIHPSEAAAKGPTWSDLFEPGVKHALIVGMGIQILQQFSGINGVLYYTPQILEQAGVGYLLSNLGLGSTSSSFLVSALTTLLMLPCIAVAMRLMDISGRRTLLLSTIPILIVSLLILVLGSLVDLGSTANASISTISVVVYFCCFVMGFGPIPNILCAEIFPTRVRGLCIAICALTFWIGDIIVTYTLPVMLNSVGLAGVFGMYAVVCFIAWVFVFLKVPETKGMPLEVIIEFFSVGARQVDAAQHNSGVW* 744
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod09g2544 743 PANTHER TONOPLAST MONOSACCHARIDE TRANSPORTER 2 1 734 - -
Dod09g2544 743 CDD MFS_GLUT_like 13 193 - -
Dod09g2544 743 PRINTS Sugar transporter signature 15 25 IPR003663 GO:0016020|GO:0022857|GO:0055085
Dod09g2544 743 PRINTS Sugar transporter signature 650 662 IPR003663 GO:0016020|GO:0022857|GO:0055085
Dod09g2544 743 PRINTS Sugar transporter signature 100 119 IPR003663 GO:0016020|GO:0022857|GO:0055085
Dod09g2544 743 PRINTS Sugar transporter signature 528 538 IPR003663 GO:0016020|GO:0022857|GO:0055085
Dod09g2544 743 PRINTS Sugar transporter signature 627 648 IPR003663 GO:0016020|GO:0022857|GO:0055085
Dod09g2544 743 ProSitePatterns Sugar transport proteins signature 1. 63 80 IPR005829 GO:0016021|GO:0022857|GO:0055085
Dod09g2544 743 PANTHER - 1 734 - -
Dod09g2544 743 Gene3D MFS general substrate transporter like domains 478 728 IPR036259 -
Dod09g2544 743 SUPERFAMILY MFS general substrate transporter 6 720 IPR036259 -
Dod09g2544 743 ProSitePatterns Sugar transport proteins signature 2. 105 130 IPR005829 GO:0016021|GO:0022857|GO:0055085
Dod09g2544 743 Gene3D MFS general substrate transporter like domains 2 257 IPR036259 -
Dod09g2544 743 ProSiteProfiles Major facilitator superfamily (MFS) profile. 7 715 IPR020846 GO:0022857
Dod09g2544 743 Pfam Sugar (and other) transporter 7 222 IPR005828 GO:0016021|GO:0022857|GO:0055085
Dod09g2544 743 Pfam Sugar (and other) transporter 502 723 IPR005828 GO:0016021|GO:0022857|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod09g2544 Dod-Chr9 46506384 46512579 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod09g2544 1 739 Organic Solute Cotransporters AT4G35300 72.740 0.0 1036
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod09g2544 - - mtr:MTR_3g118530 1257.66