Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod09g2531 ATGAAGGGAGGAGGAAAGAGGAAGAGCGAAGCGAATGGGAGTGGGAGTGGGGTGCATGATAACAACAACAGCAACAAGGATCAGATGGAGGAGGCGAGGAGAGAGGGGCAAACCCTTGTATCTGTCAATGCCAATGGCAATGGGAATGGGCCTCACACTCAGCCTCCCAATCTTGATGATGGCTTCTACGAAATCGAGGCCATTCGCCGTAAGAGGATGCGCAAGGGTCAGCTCCAGTACCTCATCAAATGGCGTGGATGGCCCGAGACCGCCAACACCTGGGAGCCTCTTGATAATCTGCAGTCAGTTCCTGATGTCATTGATGCTTTCGAGGACGGCCTGAGATCAGGTAAGCAGCAGCGGAGGCGCAAACGCAAGCATGTGGTTCATCACACACTGCCCAAGAAGAGGCACCAGCGCTCCACCTCTACTTACAGCCTCAGACGTTTTCCAACAAATACCAGTGCTACTACAACTCCTCCAACTGACAACCATCCTCAGTCTGACTCTGCTCCCCTCAGTGCCAGTGATCCCGATCCTCCCACCCATCCTCAGACTGTCTTCTTCCCTGATGATGGAGAAACTGACGGCAATGCCTCCTCTCTTGGGAGAGCCCAACAACCTACTCAGAATGGGTTTGCAGATGCTTCCAACCACATTGTTGAAAGCAATGAGGAAAATGATTACGATCCAAAGCTTAGTGAACTTAGAGCAACATCCAACAATGGGGTTGATGCAGATCATCCCCCAATACATGTTCAGCAAGCTTACACCTCGGCAGCAAATGGTCACCCACCTGATGGTGATTCCAAAGTGAATTCCATGGACCCAGTTCAAAGTGACCGTTGCAGAGGGGCGAAAAGGAGAAAGTCAGGGTCTGTGAAGAGATTCAAGTGCCCACCTGAGCCTGTTGATACAAAGAAGGCAAGCAGTTTGTCTGCTGTTACAGCTGAACCACGCCATACAGGACCTCCTGGTGGTTTGGGGAGGAATAACAGTCATGGGAAGAATGGAAATGCAGGGAATATTGTCAAGATTATAAAGCCAATAGGCTATTCAGCTACTTTATCTGGCAACACACAGGACATCTTATTAACCCTTATTGCTTTGAGGTTAGTCACTCAACTAACAACTCCATATTTCAGGTCTTACACCTTTGATAAAAGTTTGATGATTACATTAGTTTTCATGAGCATATTTGCCGAACCAAATAAATTCCCACTCCTCAATAATGAGCTTTGGTTCATGAACTCATAA 1257 0.4821 MKGGGKRKSEANGSGSGVHDNNNSNKDQMEEARREGQTLVSVNANGNGNGPHTQPPNLDDGFYEIEAIRRKRMRKGQLQYLIKWRGWPETANTWEPLDNLQSVPDVIDAFEDGLRSGKQQRRRKRKHVVHHTLPKKRHQRSTSTYSLRRFPTNTSATTTPPTDNHPQSDSAPLSASDPDPPTHPQTVFFPDDGETDGNASSLGRAQQPTQNGFADASNHIVESNEENDYDPKLSELRATSNNGVDADHPPIHVQQAYTSAANGHPPDGDSKVNSMDPVQSDRCRGAKRRKSGSVKRFKCPPEPVDTKKASSLSAVTAEPRHTGPPGGLGRNNSHGKNGNAGNIVKIIKPIGYSATLSGNTQDILLTLIALRLVTQLTTPYFRSYTFDKSLMITLVFMSIFAEPNKFPLLNNELWFMNS* 419
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod09g2531 418 SUPERFAMILY Chromo domain-like 50 114 IPR016197 -
Dod09g2531 418 ProSitePatterns Chromo domain signature. 80 100 IPR023779 -
Dod09g2531 418 MobiDBLite consensus disorder prediction 144 175 - -
Dod09g2531 418 Pfam Chromo (CHRromatin Organisation MOdifier) domain 63 112 IPR023780 -
Dod09g2531 418 MobiDBLite consensus disorder prediction 1 60 - -
Dod09g2531 418 Gene3D - 49 113 - -
Dod09g2531 418 PANTHER CHROMO DOMAIN-CONTAINING PROTEIN LHP1 1 371 IPR044251 GO:0006325|GO:0031507
Dod09g2531 418 ProSiteProfiles Chromo and chromo shadow domain profile. 63 122 IPR000953 -
Dod09g2531 418 MobiDBLite consensus disorder prediction 38 54 - -
Dod09g2531 418 CDD CD_CSD 63 112 - -
Dod09g2531 418 MobiDBLite consensus disorder prediction 119 143 - -
Dod09g2531 418 MobiDBLite consensus disorder prediction 258 337 - -
Dod09g2531 418 SMART chromo_7 62 115 IPR000953 -
Dod09g2531 418 MobiDBLite consensus disorder prediction 115 211 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod09g2531 Dod-Chr9 46330501 46333483 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod09g2531 - - adu:107478026 410.223