Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod09g2529 ATGTCAATGTTTTCAATTTGTTGTTCTTCTTCTTGGGGCATCTCAGGAGGCTGTTGTGTGGGCTTGAGGGTTGGGGCATGGCCACGGCAAAGCAGGAGCCCTCCCCCGTCGATGGTGAGGAGTAGGGCGAGAAGGGCGGTGGTAGTGATGAGCATGGAGGCTGGCGTGGGAGTGATGGGCACCAAGCTGGGAATGATGAGCTACTTCGAGCCCGACGGCGAGGTGGTCCCCGTCACCGTCGTCGGCTTCAAGGAGGGCAACATCGTCACGCAGGTCAAGACCCACGCCACCGACGGCTACAGCGCCGTCCAGGTCGGCTACCAGAGGCTGAGGCCCCGCAAGCTCACCAAGCCCGAGATGGGCCACCTCGACAAGGTCGGCGCCATCCCCATGCGCCACCTTCAGGAGTTCCGCCTCCTCTCCGTCGATGCATTCGAGCCCAACCAGCTCCTCCTCTTCCACGACATCTTCAAGGAGGGTGATCTCGTTGATGTCTCCGGCACCACCATTGGCAAGGGTTTCCAAGGTGGAATCAAGCGTCACAACTTCAAGAGGGGTCTAATGACCCATGGTTCCAAGAGTCATAGACAACTAGGATCAATTGGTGCTGGAACTACACCTGGCCGTGTGTACAAGGGAAAGAAGATGCCTGGGAGGATGGGAGGAACCAAGAGGAAGATTAGAAAGCTTAAGATTGTCAAAATTGATAAAGACCTTAATGTGGTAATGATCAAAGGAGCTGTCCCTGGTAAGCCAGGGAATCTTCTGCGGATAACTCCAGCCAAGATTGTTGGGAAGAACATTCCAAAGAATTAG 816 0.5527 MSMFSICCSSSWGISGGCCVGLRVGAWPRQSRSPPPSMVRSRARRAVVVMSMEAGVGVMGTKLGMMSYFEPDGEVVPVTVVGFKEGNIVTQVKTHATDGYSAVQVGYQRLRPRKLTKPEMGHLDKVGAIPMRHLQEFRLLSVDAFEPNQLLLFHDIFKEGDLVDVSGTTIGKGFQGGIKRHNFKRGLMTHGSKSHRQLGSIGAGTTPGRVYKGKKMPGRMGGTKRKIRKLKIVKIDKDLNVVMIKGAVPGKPGNLLRITPAKIVGKNIPKN* 272
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod09g2529 271 TIGRFAM L3_bact: 50S ribosomal protein uL3 57 258 IPR019927 GO:0003735|GO:0005840|GO:0006412
Dod09g2529 271 SUPERFAMILY Translation proteins 55 267 IPR009000 -
Dod09g2529 271 Gene3D - 88 148 - -
Dod09g2529 271 ProSitePatterns Ribosomal protein L3 signature. 157 180 IPR019926 -
Dod09g2529 271 Pfam Ribosomal protein L3 150 237 IPR000597 GO:0003735|GO:0005840|GO:0006412
Dod09g2529 271 Hamap 50S ribosomal protein L3 [rplC]. 55 262 IPR019927 GO:0003735|GO:0005840|GO:0006412
Dod09g2529 271 Gene3D Translation factors 183 263 - -
Dod09g2529 271 PANTHER 50S RIBOSOMAL PROTEIN L3-1, CHLOROPLASTIC 50 270 - -
Dod09g2529 271 PANTHER 50S RIBOSOMAL PROTEIN L3 50 270 IPR019927 GO:0003735|GO:0005840|GO:0006412
Dod09g2529 271 MobiDBLite consensus disorder prediction 190 223 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod09g2529 Dod-Chr9 46316672 46319215 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod09g2529 K02906 - gmx:100802392 397.897