Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod09g2528 ATGACGTTGCATTCGATCGTGATTCAGAAGCTGCTGAGCACGAATGCGCAGCTGGGGCGGCGAGTGGCGGCGCATCACCTGAAGGTGTACACGTATGGGATGAGGAACAAGATGGCCATCATAGACTCGGACAAGACCCTAATCTGCATGAGGAGTGCCTTCAACTTCATGGCGTCCCTGGCCCGCCGCGGCGGCCGCTTCATGTTCATCAACACCAACCCTCTTTTCGACGACATCTTCCACCTCATGACCACCCGTGTCGGCTCCTACTCCCCCTCCGCCAGCTCCCTCTGGCGCACCGGCGGCTTCCTCACCAACAGCTACAGCCCCAAGAAGTTCCGCTCCCGCCACAAGAAGCTCGTCTTCGGCCCCACCCAGCCTCCCGATTGCCTTGTCATCCTCGACACCGACTCCAAGTCCTCCGTCATCCACGAGGCCTCCCGCCTCCACATCCCCGTCGTCGCCCTCGTTCCCCTCCGACATGCCCCTCCACTCTTTCCGCCGCATCGCCTATCCCATCCCCGCCAACCCCTCTGTCCAGTTCGGTTTACTTGTTCTGCAACCTCCTCACCAAGACCCTTCTTCTCGAGAAGGACAACCTCCGCCAATCCCAATCCGCTTCTGCCGCTCCCAACATTGATGCCAGATGTAGAAGAAACTAAGAAGCTTTTGGACAAGCTTGTTGTTTTGAAGTTGGATGGTGCCCCACGTAGTGATATGGGTTTGGAAGGACCCAAATCTGCAGTTGATATTTGTAAGGGGCTGACGTACCTGGACTTAATCATTAACCAGATTGAGACCCTCAACTCCGAGTATGGATGCAGGGTTCCATTGCTTCTTTTTAACAAAGATGACACTCATGATAATACTCTAAAGGTTCTTGAAAAGTATTCGGAATCAACAGTTGATGTGCAGAGGATTAAGCAGGGTGAAGGTCCAGAGTTGGAATTGTTGGATGGACGTGGCAGCAAGGAGGAAGTAGGGTATCCTTTTGACAACAGTGATATGTTCCGTTTGTTGATGACTGGTGGAACCCTTGATAAATTATTGTTGCAGGGTAAGGAGTACATCCTTGTGATGAAGCCGGACAACGTGGTTACCTTCATTGATCCAAACATATTAAATCATTTGGTGACAAATGATATTGAATGTTGCATGGAGGTGACACCAAGCCATTCATTTAATTTAATTTTGACTCCAATGAATTTCAAGCTTTGGGAGATTGCTCGGAACCAAGACAAACATTTGAAGGACAAGTTCAAACTAATTGATACAACAAACTTGTGGGTGAGTTTAAGTGCCATTAAGAGGCTTGTTGACACTGATAGATTGAAGCACAAGAAGTCATCTGTCTCAAAGGGAAATGACTATGATCAAACACTTCTACGAGAAACAGCAGCTGGATTGGCAATACAGTTCTTTAATCGAGTGATTGGGGTCAGTGTACCTGAATCACGTTTTGTTCCCCTGGATGCAACATCAGATTTACTTCTGCTACAGTCAGATTTGCACACTTGGGAAGGGGGTGTTTTAACTCGTAATCCAGTTAGGACTAACCCTTTAAATCCTGTGATAGATTTGGGACCTGAATTTGAAAAGGTTAGGGACTTCCAAAGTCGCTTCAAATCCATTCCAAGCATCATTGAGTTAGATAGTTTGATCGTGAGAGGTGATGTGTTGTTTGGAGCTAATATTACTTTAAAGGGGCAAGTGACTATTGCTGCAAAACCTGGCTTGAAATTGGAAATTCCTGATGGGGTCGTGATTGAGAATAAGGTGAGATCAACGACCCAGCAGACATTTGAGGATGAAAGGTTGGTGGAAGCTGCTAGATTTTGTTTCAAGGGAATACATGACTGCTGA 1863 0.4772 MTLHSIVIQKLLSTNAQLGRRVAAHHLKVYTYGMRNKMAIIDSDKTLICMRSAFNFMASLARRGGRFMFINTNPLFDDIFHLMTTRVGSYSPSASSLWRTGGFLTNSYSPKKFRSRHKKLVFGPTQPPDCLVILDTDSKSSVIHEASRLHIPVVALVPLRHAPPLFPPHRLSHPRQPLCPVRFTCSATSSPRPFFSRRTTSANPNPLLPLPTLMPDVEETKKLLDKLVVLKLDGAPRSDMGLEGPKSAVDICKGLTYLDLIINQIETLNSEYGCRVPLLLFNKDDTHDNTLKVLEKYSESTVDVQRIKQGEGPELELLDGRGSKEEVGYPFDNSDMFRLLMTGGTLDKLLLQGKEYILVMKPDNVVTFIDPNILNHLVTNDIECCMEVTPSHSFNLILTPMNFKLWEIARNQDKHLKDKFKLIDTTNLWVSLSAIKRLVDTDRLKHKKSSVSKGNDYDQTLLRETAAGLAIQFFNRVIGVSVPESRFVPLDATSDLLLLQSDLHTWEGGVLTRNPVRTNPLNPVIDLGPEFEKVRDFQSRFKSIPSIIELDSLIVRGDVLFGANITLKGQVTIAAKPGLKLEIPDGVVIENKVRSTTQQTFEDERLVEAARFCFKGIHDC* 621
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod09g2528 620 Pfam Ribosomal protein S2 11 109 IPR001865 GO:0003735|GO:0005840|GO:0006412
Dod09g2528 620 Gene3D - 9 163 - -
Dod09g2528 620 CDD RPS2 11 157 IPR001865 GO:0003735|GO:0005840|GO:0006412
Dod09g2528 620 SUPERFAMILY Nucleotide-diphospho-sugar transferases 222 574 IPR029044 -
Dod09g2528 620 Gene3D Hexapeptide repeat proteins 491 599 - -
Dod09g2528 620 PANTHER UTP-GLUCOSE-1-PHOSPHATE URIDYLYLTRANSFERASE 1 592 - -
Dod09g2528 620 PANTHER - 1 592 IPR016267 GO:0003983|GO:0006011
Dod09g2528 620 Pfam UTP--glucose-1-phosphate uridylyltransferase 210 568 IPR002618 GO:0070569
Dod09g2528 620 PRINTS Ribosomal protein S2 signature 145 156 IPR001865 GO:0003735|GO:0005840|GO:0006412
Dod09g2528 620 PRINTS Ribosomal protein S2 signature 8 26 IPR001865 GO:0003735|GO:0005840|GO:0006412
Dod09g2528 620 PRINTS Ribosomal protein S2 signature 128 145 IPR001865 GO:0003735|GO:0005840|GO:0006412
Dod09g2528 620 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 192 490 IPR029044 -
Dod09g2528 620 SUPERFAMILY Ribosomal protein S2 8 157 IPR023591 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod09g2528 Dod-Chr9 46307221 46315490 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod09g2528 K00963 - gmx:100812583 774.237