Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod09g2520 ATGGCAATGGCAATGGCTGCGGCGGGCACGAGTGGAGTGGGGCTGAGCTTAGGGGTTTCGGTGTCAGCGTCTGCGGTGCGAGGAGGTCGGACTCGTTCCTTGGTGGCAATGGCTGTGTCCGTGGACGAGAAGACCAACAGCAAGTCTCTGAGTCTCGGCAAGTCCCAAGAGGCTTTCACTGCTGCCAAGGAATTGATGCCTGGAGGTGTCAACTCTCCTGTTCGCGCCTTCAAATCGGTGGGCGGACAGCCAATTGTGATCGATTCTGTGAAGGGATCCCGCATGTGGGACATCGACGGCAACGAGTACATCGACTACGTCGGTTCTTGGGGCCCTGCTATCATTGGTCACGCTGATGATCAGGTGCTCGCTGCCCTATCTGAAACAATGAAAAAAGGAACCAGCTTTGGTGCTCCTTGTCTGCTGGAAAACGCTTTGGCGGAGATGGTCATCTCTGCGGTGCCAAGCATTGAAATGGTTCGATTTGTTAATTCTGGCACGGAAGCTTGCATGGGTGTGCTCCGCCTGGCTCGTGCTTATACTGGAAATGAGAAGATCATCAAGTTTGAGGGATGTTATCATGGCCATGCGGATCCTTTTCTTGTGAAAGCAGGTAGTGGAGTTGCCACCCTAGGACTTCCTGACTCCCCTGGTGTTCCTAAAGCTGCCACTTTTGAAACCCTCATCGCCCCCTTCAATGACTTCTCAGCTGTAGAGAAGCTTTTTGAGGATAACAAAGGAGAGATAGCTGCAGTTATCCTTGAACCTGTTGTTGGAAACTCGGGTTTCATTCCTCCCAAGGCTGATTTTCTTAGTTTCTTACGCAAAATCACCAAGGACAACAACTCCCTTCTTGTCTTTGATGAAGTTATGACCGGATTTCGTTTGGCATATGGAGGTGCTCAACAATATTTTGGCATAACTCCTGATTTAACCACTCTAGGAAAGATCATTGGTGGGGGTTTGCCGGTAGGAGCTTATGGAGGAAGGAGGGACATTATGGAGATGGTGGCGCCTGCCGGACCTATGTACCAAGCTGGGACCTTGAGCGGGAACCCTTTGGCCATGACTGCAGGCATACAGACTCTGAAGCGTATTAAGGAGCCAGGGACTTACGAATATTTGGACAAAATCACAGGTGAACTTGTTCAGGGCATCATTGAAGCTGGGAAGAGGGCAGGCCATGCAATATGTGGTAGCCATATAAGTGGGATGTTTGGGTTTTTCTTCACAGAAGGACCTGTGTACAATTTTTCAGACGCCAAAAAGAGTGACACAGCCAAGTTTGCGAGGTTCTACTGGGGAATGTTGGCAGAAGGTGTCTATTTGGCACCTTCACAGTTTGAGGCTGGGTTCACTAGCTTGGCACATACTTCTGATGACATCAAAAAGACCATAGCAGCTGCGGAGAAGGTTTTCAGGGAGATTTGA 1431 0.4997 MAMAMAAAGTSGVGLSLGVSVSASAVRGGRTRSLVAMAVSVDEKTNSKSLSLGKSQEAFTAAKELMPGGVNSPVRAFKSVGGQPIVIDSVKGSRMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALSETMKKGTSFGAPCLLENALAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAYTGNEKIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKAATFETLIAPFNDFSAVEKLFEDNKGEIAAVILEPVVGNSGFIPPKADFLSFLRKITKDNNSLLVFDEVMTGFRLAYGGAQQYFGITPDLTTLGKIIGGGLPVGAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIQTLKRIKEPGTYEYLDKITGELVQGIIEAGKRAGHAICGSHISGMFGFFFTEGPVYNFSDAKKSDTAKFARFYWGMLAEGVYLAPSQFEAGFTSLAHTSDDIKKTIAAAEKVFREI* 477
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod09g2520 476 Gene3D Aspartate Aminotransferase, domain 1 57 469 IPR015422 GO:0003824
Dod09g2520 476 Gene3D - 120 368 IPR015421 GO:0003824
Dod09g2520 476 CDD OAT_like 59 473 IPR005814 GO:0008483|GO:0030170
Dod09g2520 476 PANTHER GLUTAMATE-1-SEMIALDEHYDE 2,1-AMINOMUTASE 20 474 - -
Dod09g2520 476 PANTHER BNAA09G06670D PROTEIN 20 474 - -
Dod09g2520 476 Hamap Glutamate-1-semialdehyde 2,1-aminomutase [hemL]. 54 476 IPR004639 GO:0033014|GO:0042286
Dod09g2520 476 ProSitePatterns Aminotransferases class-III pyridoxal-phosphate attachment site. 285 321 IPR005814 GO:0008483|GO:0030170
Dod09g2520 476 Pfam Aminotransferase class-III 84 393 IPR005814 GO:0008483|GO:0030170
Dod09g2520 476 SUPERFAMILY PLP-dependent transferases 52 475 IPR015424 -
Dod09g2520 476 TIGRFAM hemL: glutamate-1-semialdehyde-2,1-aminomutase 54 475 IPR004639 GO:0033014|GO:0042286
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod09g2520 Dod-Chr9 46248626 46250939 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod09g2520 K01845 - gmx:547795 807.364