Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod09g2512 ATGGCAGTCCAAGCGCACTTGTATGCCTACCCCAATAATACTACTGCTACTGGGTTTCCATTATGTGGGTCGCAGGATTTGATGTTCGATTTCAATTCCCAACAGAACCAGCATCTGCAGCCACTGGAACACCAACAACTATACAACGAACGGCAAAGGAACCAAACCATGCCTGTTACTGTTAACCCCGCTCTTCTTCTTGCTAATTCCAATGCCTACACCGCCACCAATAATTATAACTCAAATCACCTTTCAACGCCAAATTCTCATAGGTTTTCTCTTGAGTTTGAGAATCAGAGGGGCAGGGGCGAGGGCGAGGTCGATCATTATATCATCAGGTCACAGCAGAACGAGAGATTGAGAATGATGTTGCAAGAGCAGAGAAAGCAGCAAGTGGCGGCGTTACTGAAGAAGGTGGAAACGGATGCGGTTCGAATGCTGAGGGAAAGGGATGAACAGATTTTACAAGCAGCGAAGAAAAGGGCGGAGTTGGAAGAGTATCTAACAAGATTAGAGGCAGATAACATATCGTGGCGGAGAGTGGCTCAGGAGAACGAGGCCATGGTGCTGTCCCTCCATAACACCTTAGAGCAGATGAAGGAAAGGACTTGCTACCGTCACAACAGCAGCAACAGTGGGACGGAAACAGAGGATGCAGAGTCGTGCTGTGATGAAAGCAGGAGGAAAGAAGGGGAGAACAGAGTGCCGAGAAGGACGGTGGTTTGCAGAAGCTGTAATTCAGGGAGGTCGTGCGTTATGTTGCTTCCTTGCAGGCACCTCTGCTCCTGCAAGGCCTGCGAGCCTTTTCTCCAAGCTTGCCCTGTTTGCCGAATGACCAAGAAGTCCACCATAGAGACTCTGCCTTTCTAG 870 0.492 MAVQAHLYAYPNNTTATGFPLCGSQDLMFDFNSQQNQHLQPLEHQQLYNERQRNQTMPVTVNPALLLANSNAYTATNNYNSNHLSTPNSHRFSLEFENQRGRGEGEVDHYIIRSQQNERLRMMLQEQRKQQVAALLKKVETDAVRMLRERDEQILQAAKKRAELEEYLTRLEADNISWRRVAQENEAMVLSLHNTLEQMKERTCYRHNSSNSGTETEDAESCCDESRRKEGENRVPRRTVVCRSCNSGRSCVMLLPCRHLCSCKACEPFLQACPVCRMTKKSTIETLPF* 290
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod09g2512 289 PANTHER BOI-RELATED E3 UBIQUITIN-PROTEIN LIGASE 2-RELATED 1 287 - -
Dod09g2512 289 PANTHER SBP (S-RIBONUCLEASE BINDING PROTEIN) FAMILY PROTEIN 1 287 IPR017066 -
Dod09g2512 289 PIRSF SBP1_RNase_bind 8 288 IPR017066 -
Dod09g2512 289 Gene3D Death Domain, Fas 124 250 IPR011029 -
Dod09g2512 289 Coils Coil 154 174 - -
Dod09g2512 289 ProSiteProfiles Zinc finger RING-type profile. 242 277 IPR001841 -
Dod09g2512 289 Pfam Zinc finger, C3HC4 type (RING finger) 241 281 - -
Dod09g2512 289 Gene3D - 251 286 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod09g2512 Dod-Chr9 46166358 46167849 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod09g2512 241 277 Miscellaneous Gene Families AT2G21380 43.243 1.15e-06 48.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod09g2512 K19042 - gmx:100815248 242.276