Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod09g2506 ATGGCATTGCCAATTCGCAGCATTGTTACCCTTACCCTGCTTTCCATCATTCTTTCATCCACCATTGCCGCTGCTAAGGTTGCCAAGCCTCTCAAAAGGCACCATCCCCGCATTGGGCCCTACAATGTCACTTATGACGGCAGGTCTCTCTTTATCAATGGCAAACGGGACCTCCTCTACTCCGGTTCCATCCATTACACCCGAAGCACCCAGGAGATGTGGCCAGACCTTCTTGCAAAGGCAAGGCATGGAGGATTGAACGTCATCCAAACTTATGTGTTTTGGAATGCTCATGAGCCAGAGAAAGGCAAGTTCAACTTTGAAGGCAACTATGACTTGGTGAAGTTCATTAAGCTCATTCAAGAGAAAGGAATGTTTGCTACCCTCAGGGTTGGGCCTTTTATCCAAGCTGAATGGAATCATGGAGGACTTCCATATTGGCTAAGAGAGATCCCTGGCATCATATTCCGCTCTGACAATGAACCCTATAAGATGCACATGAAAGCATTCGTGTTGAAGATTGTACAAATGATGAAGGATGAGAAGCTCTTTGCTTCTCAAGGAGGCCCCATCATCTTGGCACAGATCGAGAATGAGTACAACCATATCCAACGTGCTTATGATGAACGTGGAGACAATTATGTTCAGTGGGCTGCAAACATGGCAGTAGCAACAGATACCGGAGTTCCGTGGATTATGTGCAAGCAGAAGGATGCCCCTGATCCAGTGATCAATTCATGCAATGGAAGGCACTGTGGTGATACCTTCTCAGGCCCAAACAAACCATACAAACCTACCCTATGGACTGAAAATTGGACTGCTCAGTACAGAGCATTTGGAGATCCAATATCCCAGAGATCTGTAGAAGATATTGCCTTCTCAGTTACTCGCTTCTTCTCAAAGGAAGGGAACTTAGCCAACTACTATATGTACCATGGTGGAACCAATTTTGGAAGAACAAGCGCTGCCTTTACAACAACCCGTTATTATGATGAAGCACCTCTTGATGAATACGGTCTGCAGAAAGAGCCAAAATGGAGTCACCTGAGAGATGCGCACAGGGCTATCAACCTCTGTAAGAAGGCTCTGCTAGCTGGTAGACCCAGAGTCCTAAAGCTGGGCGAATTTCATGAGATTCGAGTCTATGAGAAGCCTCAGAGTGATATATGTGCTGCTTTCATCACTAACAACCACACCAGAGATGCTGCCACCGTTAAATTCAGAGGTCAAGACTACTTTTTGCCGCCACATTCCATTAGCATCCTCCCTGATTGCAAGACTCTGGTCTACAATACAGTAAATATTGTTTCACAACATAATGCAAGGAGCTTTGTAAGGTCAGCACTTGCAAACAACCACGAGTGGGAGATGTTTTCTGAGAGCATTCCATCTACCATGCAACTGGCACCCAATAAGAGGAGTCCTGCCGAGCTCTACAGCTTGCTCAAAGACACCTCAGATTATGCATGGTTCACCACCAGCTTTGAATTGAGACCAGAACATATGCCAATGAAGAAGGGAGAACTCCCAGTTCTCCGTATTATGAGTCTTGGACATTCATTGCTTGCATTTGTGAATGGAGAATACATTGGATCTAATCACGGCACCCATGAAGAGAAATCTTTTGAACTCCAACGACCCGCAAACTTCAAGGTCGGGAAGAACCATATATCCATCTTGGCTAGCACAGTTGGACTCCCCGATAGTGGAGCATACATGGAACACAGATATGCAGGACCCAAGTCCATAAGCATCCTTGGTCTCAACACCGGAACGCTAGAGCTCACTACCAACGGCTGGGGTGACGAGGTTGGTCTCAGTGGTGAGAAGCTTCAGATTTTCACTGAAGATGGGTCAAGCAAGGTGCCGTGGATGCCAGCCAAGGGAGTTGGAAGGGCTCTCACCTGGTACAAGACAAGATTTGCGACCCCAGAGGGAAGGGATCCTGTTGCAATCCGGATGAATGGAATGGGGAAGGGAATGGTTTGGGTGAACGGCAAGAGCATTGGTCGTCACTGGATGAACTTCCTGTCTCCTACTGGAAAGCCTACCCAGTCGGAGTACCACATCCCGAGAGCATTCCTCAAGCCGGGAGGCAACTTGCTGGTGGTGCTCGAGGAGGAGAAGGTTGATCCAGGGCTCATGGAGATCTTGACCGTTAACAGGGACACCATCTGCAGTTTCATCTCTGAGAACCACGCACCCAACGTGCAGTCATGGGCAGCCAAGAATGGCACACTGCTCAACACCGAGGACACCTGGAAACCCGAGGCATGGCTCAAGTGCCACAACAAGAAGAAGATCGTGAATGTGGAGTTTGCAAGCTTCGGTAACCCTTCGGGATATTGTGGAGAGTATGCTTTGGGCAACTGCGATGCCGCTGCCACTAAGCTGATGGTGGAGGAGCAGTGCTTGGGAAAAGAGTCCTGCAAGGTTGCAGTTGATCGCACACTCTTGGTCGGCAATGGCGTCGATGCTTGCCCAGGCCTCGTGAAGACGCTTGCTATCCAAGTCAAGTGTTCCTTATAA 2529 0.4836 MALPIRSIVTLTLLSIILSSTIAAAKVAKPLKRHHPRIGPYNVTYDGRSLFINGKRDLLYSGSIHYTRSTQEMWPDLLAKARHGGLNVIQTYVFWNAHEPEKGKFNFEGNYDLVKFIKLIQEKGMFATLRVGPFIQAEWNHGGLPYWLREIPGIIFRSDNEPYKMHMKAFVLKIVQMMKDEKLFASQGGPIILAQIENEYNHIQRAYDERGDNYVQWAANMAVATDTGVPWIMCKQKDAPDPVINSCNGRHCGDTFSGPNKPYKPTLWTENWTAQYRAFGDPISQRSVEDIAFSVTRFFSKEGNLANYYMYHGGTNFGRTSAAFTTTRYYDEAPLDEYGLQKEPKWSHLRDAHRAINLCKKALLAGRPRVLKLGEFHEIRVYEKPQSDICAAFITNNHTRDAATVKFRGQDYFLPPHSISILPDCKTLVYNTVNIVSQHNARSFVRSALANNHEWEMFSESIPSTMQLAPNKRSPAELYSLLKDTSDYAWFTTSFELRPEHMPMKKGELPVLRIMSLGHSLLAFVNGEYIGSNHGTHEEKSFELQRPANFKVGKNHISILASTVGLPDSGAYMEHRYAGPKSISILGLNTGTLELTTNGWGDEVGLSGEKLQIFTEDGSSKVPWMPAKGVGRALTWYKTRFATPEGRDPVAIRMNGMGKGMVWVNGKSIGRHWMNFLSPTGKPTQSEYHIPRAFLKPGGNLLVVLEEEKVDPGLMEILTVNRDTICSFISENHAPNVQSWAAKNGTLLNTEDTWKPEAWLKCHNKKKIVNVEFASFGNPSGYCGEYALGNCDAAATKLMVEEQCLGKESCKVAVDRTLLVGNGVDACPGLVKTLAIQVKCSL* 843
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod09g2506 842 Pfam Galactose binding lectin domain 760 840 IPR000922 GO:0030246
Dod09g2506 842 ProSitePatterns Glycosyl hydrolases family 35 putative active site. 188 200 IPR019801 GO:0004553|GO:0005975
Dod09g2506 842 PANTHER GLYCOSIDE HYDROLASE FAMILY 35 PROTEIN 14 837 - -
Dod09g2506 842 PANTHER BETA-GALACTOSIDASE RELATED 14 837 IPR001944 GO:0004553|GO:0005975
Dod09g2506 842 Pfam Glycosyl hydrolases family 35 49 355 IPR031330 -
Dod09g2506 842 Gene3D - 752 842 IPR043159 -
Dod09g2506 842 PRINTS Glycosyl hydrolase family 35 signature 304 319 IPR001944 GO:0004553|GO:0005975
Dod09g2506 842 PRINTS Glycosyl hydrolase family 35 signature 323 339 IPR001944 GO:0004553|GO:0005975
Dod09g2506 842 PRINTS Glycosyl hydrolase family 35 signature 74 92 IPR001944 GO:0004553|GO:0005975
Dod09g2506 842 PRINTS Glycosyl hydrolase family 35 signature 186 201 IPR001944 GO:0004553|GO:0005975
Dod09g2506 842 PRINTS Glycosyl hydrolase family 35 signature 129 148 IPR001944 GO:0004553|GO:0005975
Dod09g2506 842 PRINTS Glycosyl hydrolase family 35 signature 267 282 IPR001944 GO:0004553|GO:0005975
Dod09g2506 842 PRINTS Glycosyl hydrolase family 35 signature 659 675 IPR001944 GO:0004553|GO:0005975
Dod09g2506 842 PRINTS Glycosyl hydrolase family 35 signature 632 646 IPR001944 GO:0004553|GO:0005975
Dod09g2506 842 PRINTS Glycosyl hydrolase family 35 signature 53 70 IPR001944 GO:0004553|GO:0005975
Dod09g2506 842 SUPERFAMILY (Trans)glycosidases 39 359 IPR017853 -
Dod09g2506 842 ProSiteProfiles SUEL-type lectin domain profile. 755 841 IPR000922 GO:0030246
Dod09g2506 842 SUPERFAMILY Galactose-binding domain-like 419 580 IPR008979 -
Dod09g2506 842 Pfam Beta-sandwich domain in beta galactosidase 363 434 IPR041392 -
Dod09g2506 842 Gene3D - 607 730 - -
Dod09g2506 842 Gene3D Glycosidases 41 359 - -
Dod09g2506 842 SUPERFAMILY Galactose-binding domain-like 597 745 IPR008979 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod09g2506 Dod-Chr9 46101184 46105842 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod09g2506 43 840 Glycoside Hydrolase AT2G16730 59.925 0.0 1043
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod09g2506 - - gmx:100791456 1236.48