Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod09g2500 ATGCAGGGGAGCAAGCGTACGTTGCAATGGGGAATTAACTCAGAAGAGGAGTGCCCAGAATGTGCAAGGCCAATCCTGACAAGCCCAAGCAAGGGGCAGGGGGCCACAATGAAACCACCGAGCGGAGACATGGGAGGAGATTCAATGGTGATGTTATTGGTGGGTGATTTGGCAAAAACGGGGACAAACCCGTTCCAGGATGGGTTCTACGCAAATGGGCCTAGAGCAGAGCCCATTGAACCCCCTCCAAATGTGCCCCTATATGACTCCACTGCTTACACTGAGTGCAAAAAGGAGCCTGAGAAGCCTCTTTACGGAGGAGGAGTTTTCAAGAGTGAACCTCAGTCTCGCGCATGGGTGAGAACTGAAGGTTTAGATTCAGCTTTGATAAGGGCCAGCTTGCAAATGGAAAATCAAACATATGACTGCGTTGGGACAAATGCAGATGGTAATAAGATCAATATAGATGTAGCTAACCCATCCCTGCGTCCATTTACCAAACAACAGTGGAGAATCAATCACCAATATGTAATCAATACTAAAAGAAAGCGTGCTGTAACTATTCATGTGTCAGATACAGATGGAAAGAGACTGCAAGGAGCAGCCATCACCATAGAACAAATTTCAAAAGACTTCCCTATTGGGTCTGCGATAGCAAAGACCATTCTTGGCAACTTACCCTATCAGAATTGGTTTGTGAAGAGGTTCAGTGCTGCAGTCTTTGAAAATGAGCTCAAATGGTACGCTACAGAGCCTGATCAAGGCAAGGTTAATTGCACCATTTCAGACCAGATGCTGCAATTTGTTAGAGCAAACAAAATAATTGCTAGAGGGCACAATATATTCTGGGAAGACCCTCAGTACACACCGGCATGGGTTCGTAACCTCACAGGCACCGAGTTACGATCTGCTGTGAATTCCCGAATCCAAAGTCTGATGAGCCAATACAAAGAAGAATTCATACACTGGGATGTCAGCAATGAAATGCTTCATTTTAACTTCTATGAAAAAAGGCTTGGACCTGATGCCACATTGCATTTCTTTGAGACAGCACACAAATCAGACCCATTAGCAACCCTGTTTATGAATGACTCCAATGTCGTGGAAACATGCAGTGATGCAATTTATTTGGAAGAAGTGTTGAGGGAAGGCTCCTCACATCCATCTGTGAATGGGATAATGCTTTGGACAGCACTCCATCCAAAAGGGTGCTACCAATTGTGCCTCACAGATACTTTTTACAAGAACCTCCCAGCAGGTGATGTAGTGGACAAACTTCTTGAAGAGTGGCAAACTGGTCGCGTAGAGGGAGTGACGGATAACCACGGTTCCTATAGCTTCTACGGATTTTTAGGAGAATATAGAGTTAGTGTCAAGTATGGCAGAAGAACTACAGATTCAACTTTCTCACTTAGTCAAGGTGAAGAAACTAGACATTTTACTCTTACACTGTGA 1455 0.4467 MQGSKRTLQWGINSEEECPECARPILTSPSKGQGATMKPPSGDMGGDSMVMLLVGDLAKTGTNPFQDGFYANGPRAEPIEPPPNVPLYDSTAYTECKKEPEKPLYGGGVFKSEPQSRAWVRTEGLDSALIRASLQMENQTYDCVGTNADGNKINIDVANPSLRPFTKQQWRINHQYVINTKRKRAVTIHVSDTDGKRLQGAAITIEQISKDFPIGSAIAKTILGNLPYQNWFVKRFSAAVFENELKWYATEPDQGKVNCTISDQMLQFVRANKIIARGHNIFWEDPQYTPAWVRNLTGTELRSAVNSRIQSLMSQYKEEFIHWDVSNEMLHFNFYEKRLGPDATLHFFETAHKSDPLATLFMNDSNVVETCSDAIYLEEVLREGSSHPSVNGIMLWTALHPKGCYQLCLTDTFYKNLPAGDVVDKLLEEWQTGRVEGVTDNHGSYSFYGFLGEYRVSVKYGRRTTDSTFSLSQGEETRHFTLTL* 485
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod09g2500 484 PANTHER GLYCOSYL HYDROLASE 148 373 IPR044846 GO:0004553|GO:0005975
Dod09g2500 484 SUPERFAMILY (Trans)glycosidases 197 434 IPR017853 -
Dod09g2500 484 Pfam Phosphate-induced protein 1 conserved region 6 80 IPR006766 -
Dod09g2500 484 ProSiteProfiles Glycosyl hydrolases family 10 (GH10) domain profile. 199 484 IPR001000 GO:0004553|GO:0005975
Dod09g2500 484 Gene3D Glycosidases 202 377 - -
Dod09g2500 484 PANTHER GLYCOSYL HYDROLASE FAMILY 10 PROTEIN 84 145 - -
Dod09g2500 484 PANTHER GLYCOSYL HYDROLASE FAMILY 10 PROTEIN 372 482 - -
Dod09g2500 484 PANTHER GLYCOSYL HYDROLASE FAMILY 10 PROTEIN 148 373 - -
Dod09g2500 484 Pfam Glycosyl hydrolase family 10 207 370 IPR001000 GO:0004553|GO:0005975
Dod09g2500 484 SMART glyco_10 245 467 IPR001000 GO:0004553|GO:0005975
Dod09g2500 484 PANTHER GLYCOSYL HYDROLASE 84 145 IPR044846 GO:0004553|GO:0005975
Dod09g2500 484 PANTHER GLYCOSYL HYDROLASE 372 482 IPR044846 GO:0004553|GO:0005975
Dod09g2500 484 MobiDBLite consensus disorder prediction 24 44 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod09g2500 Dod-Chr9 46015619 46022585 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod09g2500 86 484 Glycoside Hydrolase AT4G38650 46.893 1.87e-154 449
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod09g2500 - - jre:108993321 529.635