Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod09g2011 ATGGCACCTTTGTTCAGCTGGGGTTCAAAAGACAGCCACCGTGGAACCCCGGTGGTGGTGAAGATGGAGAACCCAAATTGGTCCATGGTGGAGCTGGAGTCTCCCTCAGAGGAAGACTTGCTCATTGGAGACCCTTCTGGCCGCGCAAGAGAAAAAGCAAGAGGCAAGAACGCAAAGCAACTCACGTGGGTTCTCCTCCTCAAAGCTCACAGAGCCGCAGGTTGCTTGGCCTCCCTCGCCCCCGCATTGTACGGCCTTGGGTCAGCCGTGAGGCGCCGCGTGGCCTCCGGAAGAACCGACGCCGACAACGACGTCGCCGGCGGCGGAAGGGAGAAGGAGAACCAAACAGTCAAGACCAGATTCTATTCCTGCATAAAAGTTTTTCTTTGGCTCTCTGTTCTTCTCTTGTGTTTTGAGGTCGCTGCGTACTTCAAAGGGTGGCATTTCGGTGCATCGCATCTTCAGTTGGAGTATTTGATTTGGGCACCTTCTTTTGGGGTGAAGGATTTCTTCGATTGGATTTACTCGCGGTGGGTTTTGATTCGGGTGGAGTACCTTGCTCCCCCTCTTCAGTTCCTTGCCAATGCGTGCATCGTGCTCTTCCTCATCCAGAGTTTGGATAGGCTTGTCCTTTGTTTAGGTTGTTTTTGGATCCGGTTTAAGAGGATCAAGCCTGTCCCCAAAGATGACGCTGTAGATCTTGAATCTGGGGAGAAGGGTTACTTCCCCATGGTGCTGGTGCAGATCCCCATGTGCAATGAGAAAGAGGTTTATCAGCAATCAATTGCTGCCGTGTGTAGTTTGGAATGGCCAAAGTCCAAGTTGTTAATTCAGGTGCTTGATGATTCGGATGACCCAACGACGCAGTTGTTGATTAAGGAGGAGGTACAAAAATGGCAGCAAGAGGGTGCCAACATTTTGTACCGGCATCGTGTGATTAGGGATGGGTATAAGGCTGGGAATCTGAAATCTGCCATGAATTGTAGCTATGTGAAAGACTACGAGTTCGTTGCAATTTTTGATGCCGACTTTCAGCCAACCCCAGATTTCCTTAAGAAAACTGTTCCTCATTTTAAGGATAATGACGAATTAGGGCTTGTTCAAGCAAGATGGTCATTTGTGAATAAGGACGAGAACTTGCTAACGAGGTTGCAGAACATCAACTTGTCGTTCCATTTTGAGGTTGAACAGCAAGTTAATGGGGTTTTTATCAATTTCTTTGGGTTCAATGGAACGGCTGGAGTGTGGAGAATAAAGGCCTTGGAGGATGCTGGTGGTTGGTTGGAGAGGACAACTGTTGAGGACATGGATATTGCTGTTCGAGCTCATCTCCATGGCTGGAAATTCATTTTCCTCAATGATGTTGAGTGCCAGTGTGAGCTGCCGGAATCTTATGAAGCTTATAGGAAACAGCAGCACAGATGGCATTCTGGGCCAATGCAATTGTTCCGCCTTTGTTTCCCTGACGTCATCCGGGCCAAGATAAGCATATGGAAGAAATTCAATATGATATTCCTCTTCTTTCTTCTTAGGAAGCTTATATTACCCTTCTATTCATTTACATTGTTCTGTATAATTCTGCCCATGACAATGTTCGTACCAGAAGCTGAGCTTCCTGCTTGGGTTGTTTGCTACATCCCTGCTACCATGTCATTTCTCAACATTCTTCCAGCTCCAAAAGCCTTCCCCTTTATTGTTCCCTATCTCCTATTTGAGAACACCATGTCAGTAACAAAATTCAATGCCATGATCTCTGGCCTATTCCAGCTTGGTAGTGCATATGAGTGGGTGGTCACTAAGAAATCGGGTCGTTCTTCTGAGGGTGATCTGGTTTCATTGATTGAGAAGGGACCAAAGCATCAAAGAGGATCCTCAGCACCTGACCTCGAGGAAATGAAAGAGGAAATCCAAAGGCGGGAGCAAAAGGCTGCTAAGAAGAAGAAGAAGAAGCATAATAGAATATATATGAAGGAGCTGGCTTTGGCATTTCTACTTCTAACAGCCGCAGCAAGGAGTCTCTTATCTGCACAGGGAATCCACTTCTACTTCTTGTTATTCCAGGGCATATCATTCCTTTTGGTTGGGCTAGACTTGATTGGTGAACAGGTGGACTGA 2115 0.47 MAPLFSWGSKDSHRGTPVVVKMENPNWSMVELESPSEEDLLIGDPSGRAREKARGKNAKQLTWVLLLKAHRAAGCLASLAPALYGLGSAVRRRVASGRTDADNDVAGGGREKENQTVKTRFYSCIKVFLWLSVLLLCFEVAAYFKGWHFGASHLQLEYLIWAPSFGVKDFFDWIYSRWVLIRVEYLAPPLQFLANACIVLFLIQSLDRLVLCLGCFWIRFKRIKPVPKDDAVDLESGEKGYFPMVLVQIPMCNEKEVYQQSIAAVCSLEWPKSKLLIQVLDDSDDPTTQLLIKEEVQKWQQEGANILYRHRVIRDGYKAGNLKSAMNCSYVKDYEFVAIFDADFQPTPDFLKKTVPHFKDNDELGLVQARWSFVNKDENLLTRLQNINLSFHFEVEQQVNGVFINFFGFNGTAGVWRIKALEDAGGWLERTTVEDMDIAVRAHLHGWKFIFLNDVECQCELPESYEAYRKQQHRWHSGPMQLFRLCFPDVIRAKISIWKKFNMIFLFFLLRKLILPFYSFTLFCIILPMTMFVPEAELPAWVVCYIPATMSFLNILPAPKAFPFIVPYLLFENTMSVTKFNAMISGLFQLGSAYEWVVTKKSGRSSEGDLVSLIEKGPKHQRGSSAPDLEEMKEEIQRREQKAAKKKKKKHNRIYMKELALAFLLLTAAARSLLSAQGIHFYFLLFQGISFLLVGLDLIGEQVD* 705
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod09g2011 704 Coils Coil 626 649 - -
Dod09g2011 704 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 235 460 IPR029044 -
Dod09g2011 704 PANTHER - 6 703 - -
Dod09g2011 704 SUPERFAMILY Nucleotide-diphospho-sugar transferases 245 521 IPR029044 -
Dod09g2011 704 PANTHER XYLOGLUCAN GLYCOSYLTRANSFERASE 12-RELATED 6 703 - -
Dod09g2011 704 Pfam Glycosyl transferase family group 2 337 532 IPR001173 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod09g2011 Dod-Chr9 41640228 41643796 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod09g2011 1 704 Miscellaneous Gene Families AT4G07960 79.469 0.0 1115
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod09g2011 - - gmx:100805969 1245.34