Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod09g2007 ATGCTTTCTAAAAAGGCTAGTGAGGGCTCTCATGGCCAAGACTCTTCTTACTTTGAAGGATGGCAAAAGTACGAGAAGAACCCCTATCATCCTGTTCAAAATCCAACTGGAATCATTCAGATGGGACTTGCGGAGAATCAGCTTTCATTTGACCTTCTTGAATCATGGCTTCGAAGAAATCCTAATGTAGTGGCGCTGAAGAATGATGGGGTATCCGCATTTAGGGAACTTGCTTTGTTCCAGGATTACCATGGCTTACCAGCTTTCAAAAATGAGCTGGTGAACTTTATGGCAAAAATAAGAGGGAACAGAGTCAAATTTGCTTCGGAAAAGCTTGTCCTCACAGCTGGGGCCACTCCAGCAAATGAAATTCTCATGTTTTGCCTCGCCGACCACGGGGAAGCTTTCATTCTTCCCACGCCATATTATCCTGGGTTTGATAGGGATCTCAAATGGCGAACTGGGGTTGAGATTGTCCCAATGCACTGCTCCAGCTCAAATGGTTTCAGAATCACTCCTTGCGCATTGGAACAAGCCTATGAAAAGGCTCAAAAACTGAACCTCAACGTCAAAGGTGTACTAGTAACAAACCCCTCGAATCCGTTAGGCATAACCATGGCCAGAACGGAGCTTAACCACCTGGTCGATTTCTCAATCAAAAAGGACATTCACATAATAAGCGACGAAATCTACTCAGGTACAGTCTTCAATTCACCCAGGTTTGTAAGCATCATGGAAGTCGTGAATGACAGAAACAGCCCCGATGGCGACGCTATTCGGAGCCGCATCCATGTCGTTTATAGCCTCTCAAAGGACCTAGGCGTTCCGGGGTTTCGGGTAGGGATGGTTTACTCTAACGACGAAACGGTTGTGGCTGCAGCCACCAAGATGTCAAGCTTTGGACTCGTTTCCTCGCAGACTCAGTATTTGCTTGCCAATATGCTCTCTGACAAGAAATTCACTGAAAAGTACATGGAGGAGAACCGGAGGAGGCTGAAGAGGCGCAAGGACATGCTTGTTTGTGGCTTGAGAAATGCAGGGATACGATGTTTAAGGAGCAGTGCTGGGTTATTCTGTTGGGTGGACATGAGGCACCTGTTAAGTGCTTACACCTTTGAGGCAGAGAAGGAGCTTTGGAAGAGGATTCTATGTGAGGTTGGTTTGAACATATCTCCGGGGTCTTCTTGCCACTGCTCTGAACCGGGGTGGTTCAGGATTTGCTTTGCCAACATGTCCGAGGACACTTTAAAGGTTGCAATGCTACGTATGAAAGCCTTTACAGACTCAATCTTCTCTGAAGTCAATGGCGAAGGCAATAGAAGTTATAATAACATTAGAAGGAAGTAG 1347 0.4618 MLSKKASEGSHGQDSSYFEGWQKYEKNPYHPVQNPTGIIQMGLAENQLSFDLLESWLRRNPNVVALKNDGVSAFRELALFQDYHGLPAFKNELVNFMAKIRGNRVKFASEKLVLTAGATPANEILMFCLADHGEAFILPTPYYPGFDRDLKWRTGVEIVPMHCSSSNGFRITPCALEQAYEKAQKLNLNVKGVLVTNPSNPLGITMARTELNHLVDFSIKKDIHIISDEIYSGTVFNSPRFVSIMEVVNDRNSPDGDAIRSRIHVVYSLSKDLGVPGFRVGMVYSNDETVVAAATKMSSFGLVSSQTQYLLANMLSDKKFTEKYMEENRRRLKRRKDMLVCGLRNAGIRCLRSSAGLFCWVDMRHLLSAYTFEAEKELWKRILCEVGLNISPGSSCHCSEPGWFRICFANMSEDTLKVAMLRMKAFTDSIFSEVNGEGNRSYNNIRRK* 449
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod09g2007 448 PANTHER 1-AMINOCYCLOPROPANE-1-CARBOXYLATE SYNTHASE 11 1 435 - -
Dod09g2007 448 ProSitePatterns Aminotransferases class-I pyridoxal-phosphate attachment site. 268 281 IPR004838 GO:0003824|GO:0009058|GO:0030170
Dod09g2007 448 Gene3D - 61 317 IPR015421 GO:0003824
Dod09g2007 448 PANTHER BIFUNCTIONAL ASPARTATE AMINOTRANSFERASE AND GLUTAMATE/ASPARTATE-PREPHENATE AMINOTRANSFERASE-RELATED 1 435 - -
Dod09g2007 448 CDD AAT_like 75 425 - -
Dod09g2007 448 PRINTS 1-aminocyclopropane-1-carboxylate synthase signature 41 67 - -
Dod09g2007 448 PRINTS 1-aminocyclopropane-1-carboxylate synthase signature 74 90 - -
Dod09g2007 448 PRINTS 1-aminocyclopropane-1-carboxylate synthase signature 187 211 - -
Dod09g2007 448 PRINTS 1-aminocyclopropane-1-carboxylate synthase signature 111 131 - -
Dod09g2007 448 PRINTS 1-aminocyclopropane-1-carboxylate synthase signature 133 154 - -
Dod09g2007 448 PRINTS 1-aminocyclopropane-1-carboxylate synthase signature 223 246 - -
Dod09g2007 448 PRINTS 1-aminocyclopropane-1-carboxylate synthase signature 262 286 - -
Dod09g2007 448 PRINTS 1-aminocyclopropane-1-carboxylate synthase signature 294 317 - -
Dod09g2007 448 Pfam Aminotransferase class I and II 39 420 IPR004839 GO:0009058|GO:0030170
Dod09g2007 448 SUPERFAMILY PLP-dependent transferases 6 426 IPR015424 -
Dod09g2007 448 Gene3D Aspartate Aminotransferase, domain 1 27 422 IPR015422 GO:0003824
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod09g2007 Dod-Chr9 41571513 41576179 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod09g2007 K01762 - gmx:100803507 729.169