Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod09g2002 ATGATTCGAAGAGCTGCGTGCTTTTACAGTTTAAGGGAATTGCTTATTATTCGACCTGCTGGTTCTCCTTCAACGTCCAAGATCGGAGCTTACAATTGCTATGCATCTCAGAGCTCCTCTCTTAAAATCCCCGACTCAACCAACAGGGACGATGAATATGCTGAGGTGGACTGGGACAGTCTCGGGTTTGGACTGATGCCAACTGATTTCATGTACGTTAATAAATGTTGTGAGGGCCAGGATTTTGGACACGGACAACTCAGTCGTTATGGGAACATTGAGCTTAGCCCATCAGCTGGGGTGCTAAATTATGGTCAGGGATTATTCGAAGGCACCAAAGCATACAGAAAAGAAAACGGGCACCTGTTGCTCTTCCGTCCAGAGCAAAATGCCATGCGCATGAAGATTGGCGCCGAGAGAATGTGCATGGCATCCCCTTCCATTGACCAATTTGTGGATGCTTTGAAGCAAACTGCATTGGCAAACAAGCGCTGGGTTCCTCCTCCGGGCAAAGGATCGTTGTACCTTCGGCCTCTGCTATTAGGGAGTGGCCCTGTTTTGGGTTTGGCTCCGGCACCTGAATACACATTCTTGATATATGCTTCCCCTGTTCGCAACTATTTCAAAGAGGGTTCTGCGCCACTCAACTTGTATGTGGAGGAGAATTTTGATCGTGCTTCTCGCCGTGGTACTGGAAGCGTTAAAACCATTTCTAATTATGCCCCAGTATTGATGGCACAAATTAGAGCCAAGAAGGCAGGGTTTTCAGATGTGCTGTACCTTGATTCAGTCTCAAAGAAAAATCTGGAGGAGGTCTCTTCTTGTAACATTTTTATTGCCAAGGGCAAATACATCTCAACACCTGCTACCAATGGAACCATTCTTGCTGGAATTACCAGAAAAAGTGTCATTGAACTTGCTCGTGATCTCGGCTATCAGGTAGGAGAGCGTGTCGTTGCAGTGGATGAATTAATGGAGGCGGATGAAGTGTTCTGCACAGGAACTGCTGTTGGTGTTGCTCCCGTGGGGAGCATCACATACCAGGATAGAAGGATGGAATACAAAACGGGTTCTGGAACCATTTGTCAAGAGCTAAACAATACCCTTTTAGGAATTCAAACGGGTATCATTGAAGATAAGAAGGGATGGATCATTGAAATTGACTGA 1167 0.461 MIRRAACFYSLRELLIIRPAGSPSTSKIGAYNCYASQSSSLKIPDSTNRDDEYAEVDWDSLGFGLMPTDFMYVNKCCEGQDFGHGQLSRYGNIELSPSAGVLNYGQGLFEGTKAYRKENGHLLLFRPEQNAMRMKIGAERMCMASPSIDQFVDALKQTALANKRWVPPPGKGSLYLRPLLLGSGPVLGLAPAPEYTFLIYASPVRNYFKEGSAPLNLYVEENFDRASRRGTGSVKTISNYAPVLMAQIRAKKAGFSDVLYLDSVSKKNLEEVSSCNIFIAKGKYISTPATNGTILAGITRKSVIELARDLGYQVGERVVAVDELMEADEVFCTGTAVGVAPVGSITYQDRRMEYKTGSGTICQELNNTLLGIQTGIIEDKKGWIIEID* 389
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod09g2002 388 Gene3D - 33 215 IPR043131 -
Dod09g2002 388 SUPERFAMILY D-aminoacid aminotransferase-like PLP-dependent enzymes 49 384 IPR036038 GO:0003824
Dod09g2002 388 PANTHER BRANCHED-CHAIN-AMINO-ACID AMINOTRANSFERASE 15 388 - -
Dod09g2002 388 CDD BCAT_beta_family 94 375 IPR033939 GO:0004084|GO:0009081
Dod09g2002 388 PANTHER AMINO ACID AMINOTRANSFERASE 15 388 IPR005786 GO:0004084|GO:0009081
Dod09g2002 388 Pfam Amino-transferase class IV 107 345 IPR001544 GO:0003824
Dod09g2002 388 Gene3D - 216 387 IPR043132 -
Dod09g2002 388 PIRSF BCAT1 34 388 IPR005786 GO:0004084|GO:0009081
Dod09g2002 388 ProSitePatterns Aminotransferases class-IV signature. 271 300 IPR018300 GO:0003824
Dod09g2002 388 TIGRFAM ilvE_II: branched-chain amino acid aminotransferase 84 387 IPR005786 GO:0004084|GO:0009081
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod09g2002 Dod-Chr9 41526077 41534814 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod09g2002 K00826 - gmx:100782644 649.047