Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod09g1964 ATGGATTCTTCTCAATCACAAGGGTGTAAGCTGGCTGGTTTGGTGGAAAATGCATCAATCCAGACTAGGGATGAATCTTGTTTGGATGGCGTGCCTGTTTATGTTAAGGAGCTAATTGCTGGTGGCTTTGCCGGTGCGCTCTCTAAGTCTGCTGTTGCACCGCTTGAACGTGTCAAGATACTCTGGCAGACAAGGACAGCAGGATTTCAGACTCTTGGTGTGTATCAGTCCTTAAATAGGTTATTCAAGCATGAAGGCTTTCTAGGACTATATAAAGGAAATGGAGCTAGCGTTATTCGGATTGTTCCTTATGCAGCCTTGCATTTTATGGCATATGAGCGCTATAAAAGTTGGCTCTTGACTAATTATCCTATGATAGGATCGGGTCCTGTTGTTGATCTTTTAGCTGGTTCCGCAGCAGGAGGAACTTCAGTTTTATGTACATACCCCCTAGACCTTGCTCGTACTAAACTTGCTTATCAGGTGGTGGAGACAAGATCATCCAGTATCCAAGATGGTGTGAAAGGAGTTCATTCTCAACCTGCACGTAATGGCATTAAAGGTGTACTAACAGGTGTATATAAGGAAGGGGGAGTTCGCGGACTTTATAGGGGTGCAGGACCAACTATTACTGGAATTCTTCCATATGCTGGTTTGAAGTTCTACATGTATGAGAAATTGAAGCTTCATGTTCCTGAAGAACATCAAAAGTCCATTTTGATTCGCCTTTCTTGTGGAGCTCTGGCTGGGTTGTTTGGCCAGACTTTAACATACCCTTTAGATGTTGTTAAGCGACAGATGCAGGTTGGCAGCCTCCAAAATGCAGCTCATGAAGATGCCAGATACAAAAATACATTTGATGGACTTAGGAAGATCGTTAGAAACCAAGGGTGGAGGCAGTTGTTTGCAGGCGTAAGCATTAACTATATAAGGATTGTTCCTTCGGCTGCAATCAGTTTCACCACATATGACATGATGAAGACTTGGCTTGGCATACCACCCCAGCAAAAGTCTCAATCAGTTTCCACAGGATAA 1035 0.4357 MDSSQSQGCKLAGLVENASIQTRDESCLDGVPVYVKELIAGGFAGALSKSAVAPLERVKILWQTRTAGFQTLGVYQSLNRLFKHEGFLGLYKGNGASVIRIVPYAALHFMAYERYKSWLLTNYPMIGSGPVVDLLAGSAAGGTSVLCTYPLDLARTKLAYQVVETRSSSIQDGVKGVHSQPARNGIKGVLTGVYKEGGVRGLYRGAGPTITGILPYAGLKFYMYEKLKLHVPEEHQKSILIRLSCGALAGLFGQTLTYPLDVVKRQMQVGSLQNAAHEDARYKNTFDGLRKIVRNQGWRQLFAGVSINYIRIVPSAAISFTTYDMMKTWLGIPPQQKSQSVSTG* 345
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod09g1964 344 ProSiteProfiles Solute carrier (Solcar) repeat profile. 32 118 IPR018108 -
Dod09g1964 344 ProSiteProfiles Solute carrier (Solcar) repeat profile. 128 230 IPR018108 -
Dod09g1964 344 Pfam Mitochondrial carrier protein 237 330 IPR018108 -
Dod09g1964 344 Pfam Mitochondrial carrier protein 130 231 IPR018108 -
Dod09g1964 344 Pfam Mitochondrial carrier protein 34 122 IPR018108 -
Dod09g1964 344 PANTHER SOLUTE CARRIER FAMILY 25 19 338 - -
Dod09g1964 344 Gene3D Mitochondrial carrier domain 33 331 IPR023395 -
Dod09g1964 344 ProSiteProfiles Solute carrier (Solcar) repeat profile. 237 329 IPR018108 -
Dod09g1964 344 SUPERFAMILY Mitochondrial carrier 35 325 IPR023395 -
Dod09g1964 344 PRINTS Mitochondrial carrier protein signature 50 64 IPR002067 GO:0055085
Dod09g1964 344 PRINTS Mitochondrial carrier protein signature 143 161 IPR002067 GO:0055085
Dod09g1964 344 PRINTS Mitochondrial carrier protein signature 37 50 IPR002067 GO:0055085
Dod09g1964 344 PRINTS Mitochondrial carrier protein signature 93 113 IPR002067 GO:0055085
Dod09g1964 344 PRINTS Mitochondrial carrier protein signature 203 221 IPR002067 GO:0055085
Dod09g1964 344 PRINTS Mitochondrial carrier protein signature 246 268 IPR002067 GO:0055085
Dod09g1964 344 PANTHER GRAVES DISEASE MITOCHONDRIAL SOLUTE CARRIER PROTEIN-LIKE 19 338 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod09g1964 Dod-Chr9 41137870 41142025 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod09g1964 28 312 Organic Solute Cotransporters AT4G26180 55.594 5.07e-113 328
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod09g1964 - - gmx:100800243 584.719