Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod09g1963 ATGGAGGAAGGGTACCCCAGAAGCAAGTTTAAGAGGGTCTGTGTCTTCTGCGGCAGCAACTCTGGCAACCGTGAAGTCTTCAGTGACGCTGCTATTCAATTGGGCAATGAACTGGTTAAGCGGAATATAGACTTGGTGTATGGTGGGGGCAGTGTTGGGCTGATGGGCTTAATATCCCAGAGGGTGTACGATGGAGGCTGCCATGTCCTAGGGATCATTCCCAAAGCTCTCATGCCTCTTGAGATATCAGGTGAAACAGTAGGTGAAGTAAGAATTGTTTCAGATATGCATGAGCGTAAGGCTGCAATGGCTCGAGAAGCTGATGCATTTGTTGCTCTTCCTGGAGGATATGGAACCATGGAAGAGTTGTTGGAGATGATAACTTGGGCTCAACTTGGAATTCATAAAAAGCCGGTTGGTCTACTGAATGTTGATGGTTACTATAACTGTTTGCTTGCACTATTTGACAATGGTGTCAAAGAAGGCTTCATTAAGCCCAGCGCAAGGAATATAGTTGTCTCTGCTCCTTCGGCCAAAGAACTTATGATGAAGATGGAGCATTACACTCCTTCGCATGAACATGTCGCCCCACATGAGAGCTGGCAGATGAAGCAATTAGGTCATTATCCAGGACAAGAAAACGAAGAGTGA 651 0.4624 MEEGYPRSKFKRVCVFCGSNSGNREVFSDAAIQLGNELVKRNIDLVYGGGSVGLMGLISQRVYDGGCHVLGIIPKALMPLEISGETVGEVRIVSDMHERKAAMAREADAFVALPGGYGTMEELLEMITWAQLGIHKKPVGLLNVDGYYNCLLALFDNGVKEGFIKPSARNIVVSAPSAKELMMKMEHYTPSHEHVAPHESWQMKQLGHYPGQENEE* 217
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod09g1963 216 Gene3D - 9 204 - -
Dod09g1963 216 SUPERFAMILY MCP/YpsA-like 9 188 - -
Dod09g1963 216 PANTHER LOG FAMILY PROTEIN YJL055W 8 206 - -
Dod09g1963 216 Pfam Possible lysine decarboxylase 55 185 IPR031100 -
Dod09g1963 216 TIGRFAM TIGR00730: TIGR00730 family protein 11 188 IPR005269 GO:0009691|GO:0016787
Dod09g1963 216 PANTHER CYTOKININ RIBOSIDE 5'-MONOPHOSPHATE PHOSPHORIBOHYDROLASE 8 206 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod09g1963 Dod-Chr9 41128482 41131682 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod09g1963 K22522 - gmx:100785484 417.157