Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod09g1947 ATGCGGCACAAAGACGCCCTGCTCTCAACTCTCAAACAGCTTATGTTGCAGAAAAATGTGAAGAATGTTAAACAATTGATTGCCCTGCACCAAGTTCCTGATGTTTCTTTACCTCGTTATGTTCGGGTGAATACACTCAAACTGGATGTTGGTTGCGCCTTACTTGAACTTAAGGAGAAATACTCGGTTCGGAAAGATGATTTACTGCCCGACTTGCTGGTACTTCCACCAGGCACTGATTTGCATGATCATCCTCTTGTCAGGAACGGAAGTATCTTTCTGCAAGGCAAGGCGAGTTCCATGGTAGCAACGGCCCTTAACCCTGAACCTGGATGGGAGGTTCTTGATGCATGTGCGGCACCAGGAAACAAAACTGTCCACCTTGCTGCCCTTATGAAGAGAAAGGGTAGGATTATAGCATGTGAATTGAGTAAAGAAAGGATTAAGCGTTTAAAGGACACCATAAAGCTATCTGGTGCTTCTAACATACAAGTTCTGAACGAGGATTTCTTGAACATAGATCCCAAAGCTTCTTCATATTCTAAGGTGCAGGCTATACTTTTGGATCCTTCCTGCTCTGGTTCTGGTACTGCTGCTTCAAGACTAGACCATTTACTCCCATCTAAAGCAGCAGGTCAGGATGCTGATATGGAAAGATTGAACAAGCTTGCAGCTTTTCAGAGAAAGGCTCTTCAGCATGCTCTACTTTTTCCAGCAGTTGAAAAAATAGTCTACAGCACATGCTCAGTCAACGAAATTGAGAATGAAGATGTCATCAAATCTGTTCTGCCCATTGCCGAATCGTACGGATTTCAACTGGTGAAACCCTTTCCTGAGTGGCACCGCCGTGGCCTTCCAGGGTTTGAAGGCTCTGAGAACCTGGTTCGGACAGATCCTGCCAAGGATGGTGAGGGTTTCTTCATTGCTTTGTTTTCCAAAAGAAGTGCTACCCTTCCAGGAAGGTCAGATGAAAATGGAAGTAGAACACCTCGTAGCTCTTCCAGAACCAGAAAAGTGCAAAGGAAGAAGCACATTCTGCCCATTATTCATACTGACCCATTCAGATTGTGGTTGCATACTCATCGGCTGAACCGGCCTAGATCAATAGACGAGTCCCGCCGTGATCAGAATAAACAAATTGGCGGCTAA 1149 0.4517 MRHKDALLSTLKQLMLQKNVKNVKQLIALHQVPDVSLPRYVRVNTLKLDVGCALLELKEKYSVRKDDLLPDLLVLPPGTDLHDHPLVRNGSIFLQGKASSMVATALNPEPGWEVLDACAAPGNKTVHLAALMKRKGRIIACELSKERIKRLKDTIKLSGASNIQVLNEDFLNIDPKASSYSKVQAILLDPSCSGSGTAASRLDHLLPSKAAGQDADMERLNKLAAFQRKALQHALLFPAVEKIVYSTCSVNEIENEDVIKSVLPIAESYGFQLVKPFPEWHRRGLPGFEGSENLVRTDPAKDGEGFFIALFSKRSATLPGRSDENGSRTPRSSSRTRKVQRKKHILPIIHTDPFRLWLHTHRLNRPRSIDESRRDQNKQIGG* 383
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod09g1947 382 Pfam 16S rRNA methyltransferase RsmB/F 103 311 IPR001678 GO:0008168
Dod09g1947 382 CDD AdoMet_MTases 114 202 - -
Dod09g1947 382 PANTHER BNAA09G04380D PROTEIN 1 340 - -
Dod09g1947 382 Gene3D Sun protein; domain 3 53 94 - -
Dod09g1947 382 PRINTS RNA (C5-cytosine) methyltransferase signature 86 100 IPR023267 GO:0001510
Dod09g1947 382 PRINTS RNA (C5-cytosine) methyltransferase signature 184 196 IPR023267 GO:0001510
Dod09g1947 382 PRINTS RNA (C5-cytosine) methyltransferase signature 296 313 IPR023267 GO:0001510
Dod09g1947 382 PRINTS RNA (C5-cytosine) methyltransferase signature 240 256 IPR023267 GO:0001510
Dod09g1947 382 PRINTS RNA (C5-cytosine) methyltransferase signature 115 125 IPR023267 GO:0001510
Dod09g1947 382 PANTHER NOP2 YEAST -RELATED NOL1/NOP2/FMU SUN DOMAIN-CONTAINING 1 340 IPR023267 GO:0001510
Dod09g1947 382 MobiDBLite consensus disorder prediction 318 342 - -
Dod09g1947 382 Gene3D Vaccinia Virus protein VP39 95 319 IPR029063 -
Dod09g1947 382 MobiDBLite consensus disorder prediction 318 333 - -
Dod09g1947 382 ProSiteProfiles SAM-dependent MTase RsmB/NOP-type domain profile. 29 314 IPR001678 GO:0008168
Dod09g1947 382 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 37 313 IPR029063 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod09g1947 K15264 - gmx:100775620 570.466