Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod09g1939 ATGAAAACGCTGGCAATATCATCATCATCACTGCTTAGCTTCAAGTCTTTGAATCTTCACCACCACCGCAACACTACTCATTCCCCACTCTTCTTCCCTCGCTCCCGTAAACCCTTCTTCCCCTTTCTCTCTCCCCGCAACTGCAGAATCCACTCTTCTCCAACACTTTCAATGGCTGCCTCCCTCAACAACGAACGAGCCCGTGCACCTCCCGCCACTCCCTTGCCCCCTCCCCTTCTCTCTAAGTTCAAAATTGGCCTGTGCCAGCTGTCTGTGACCCCCGACAAGGACAGGAACATCGTCCATGCCCGCTCCGCCATTCAGGACGCTGCCTCAAAGGGTGCCCAGCTTGTTCTCCTCCCCGAAATTTGGAATAGTCCTTATTCCAATGATAGTTTCCCCGTCTACGCCGAGGATATTGACGCTGGCGGCGATGCGTCTCCTTCCACTGCCATGCTCTCTGAGCTGTCCCGTCTCTTGAAGATCACCATTGTTGGTGGTTCTATACCGGAGCGTTCAGGAGGCAAGTTGTACAACACCTGTTGTGTCTTTGGCACCGATGGGAAGCTAAAAGCCAAGCACCGCAAGATACACCTTTTTGATATCGACATCCCTGGGAAGATTACCTTTGTCGAATCACGAACTCTTACAGCTGGGGAAACTCCGACTATTGTGGACACAGAGGTTGGGCGCATTGGCATAGGCATCTGTTATGATATTCGTTTTCCGGAACTAGCAATGATATATGCAGCAAGAGGTGCGCACTTGCTCTGCTATCCTGGGGCATTTAACATGACAACTGGACCATTGCACTGGGAATTATTGCAGAGGGCAAGGGCTACAGATAATCAGTTATATGTTGCAACCTGTTCACCTGCTCGGGATACTGCATCTAGCTATGTGGCTTGGGGCCACTCCACTCTTGTTGGACCCTTTGGAGAAGTTCTGGCTACTACAGAACATGAGGAAGCAATCATCATCGCAGAAATTGACTATTCGATATTAGAGCAGAGAAGGACAAGTCTCCCTGTGAGTAAGCAACGAAGAGGTGATCTGTACCAATTGGTGGATTTTCAAAGACTGAATTCCCACTGA 1095 0.4995 MKTLAISSSSLLSFKSLNLHHHRNTTHSPLFFPRSRKPFFPFLSPRNCRIHSSPTLSMAASLNNERARAPPATPLPPPLLSKFKIGLCQLSVTPDKDRNIVHARSAIQDAASKGAQLVLLPEIWNSPYSNDSFPVYAEDIDAGGDASPSTAMLSELSRLLKITIVGGSIPERSGGKLYNTCCVFGTDGKLKAKHRKIHLFDIDIPGKITFVESRTLTAGETPTIVDTEVGRIGIGICYDIRFPELAMIYAARGAHLLCYPGAFNMTTGPLHWELLQRARATDNQLYVATCSPARDTASSYVAWGHSTLVGPFGEVLATTEHEEAIIIAEIDYSILEQRRTSLPVSKQRRGDLYQLVDFQRLNSH* 365
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod09g1939 364 Pfam Carbon-nitrogen hydrolase 85 335 IPR003010 GO:0006807
Dod09g1939 364 PANTHER OMEGA-AMIDASE, CHLOROPLASTIC-LIKE 40 363 - -
Dod09g1939 364 ProSiteProfiles Carbon-nitrogen hydrolase domain profile. 83 332 IPR003010 GO:0006807
Dod09g1939 364 PANTHER NITRILASE-RELATED 40 363 - -
Dod09g1939 364 CDD nit 84 349 IPR045254 GO:0016811
Dod09g1939 364 ProSitePatterns Uncharacterized protein family UPF0012 signature. 233 253 IPR001110 -
Dod09g1939 364 Gene3D - 80 358 IPR036526 -
Dod09g1939 364 SUPERFAMILY Carbon-nitrogen hydrolase 81 356 IPR036526 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod09g1939 Dod-Chr9 40945026 40960220 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod09g1939 K13566 - gmx:100817195 553.132