Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod09g1934 ATGACGCGGAATCGATGGCGCCAAAAGACGACGACGTCACTGCCCTCTCGAAAGCGCTGGGCGTCCCAGTCACTAACCGATGACTGCGGAATAGCAAGCAAAGACTTCGGCGGCATGAAGTCCGTGAAGCCCCTGGCACTCGTCAGGCCCGCCACCGCAGACGACGTCGCTCTGGCGGTTACAGCGGCAGCGAGGTCGCCAACTCTCACGGTTGCCGCCAGAGGGAATGGCCACTCCATTAACGGCCAGGCCATGGCGGAGCAAGGGCTCGTCCTGGACATGCGTGCCATGGAGGAACGAATTCAGCTCGTTCGTATTGATGGCTCCCCATACGTCGACGTTTCGGGCGGGGCATTATGGGAAGATGTCCTTAAACGCTGCGTTTCCGAGTTCGGGCTGGCGCCGAGGTCGTGGACAGATTATCTGAGTTTAACGGTGGGTGGAACCCTGTCGTACGCTGGAGTCAGCGGCCAGGCGTTCCGTTACGGACCACAGACATCCAACGTAACGGAATTGGAAGTTGTAACGGGAAAAGGCGATACGTTGGTGTGCTCAGCAACGCAAAATTCCGAGCTTTTCTTTGGGGTTCTTGGTGGCCTCGGACAGTTCGGTGTCATTACTAGGGCTAGGGTCGTGCTTCAACAAGCTCCAGATATGGTGAGATGGATAAGGGTAGTTTACTGTGAATTTGAGGAGTTCAGTGAGGATGCGGAGTCTCTGGTGGCTGCCGAAGTAGGAGAATCTTTTGACTACGTGGAAGGGTTCGTTGTAGTGAATAGCAACGACCCCGCCAATGGATGGCCCACCGTGCCATTGGACCCGCAACAAGTGTTCGACCCGCGCTATATCCCTTCCACTGCTGGACCTGTTCTCTATTGCTTGGAGCTTGCTCTCCACCATTGTTGTAACACAGACAAACCTTCCCATGTTGATGCGGATGTGGATCGATTGCTTGGACGGCTACGATTTGTTAAGGGCTTGAAGTTTCAGGTGGATATGAGATACATGGAATTCTTGCTACGTGTAAAGCGGGTGGAGGAACAAGCAATGGCCAACGGCATCTGGGGTGCACCTCACCCTTGGCTGAACCTGTTCGTGTCGAAGTCCAACATTGCTGAGTTTGATCGTGAGGTGTTCAAGAACATCCTCAAAAAGGGGGTCGATGGGCCCATCTTGGTCTACCCACTGTTGCGGAACAAGTGGGATAGTCGTCACTCCGTGGTGGTGCCAGACAGCGACATATTCTACATAGTAGCGTTGCTTCGATTCACTCCACCACCCCCAAAGGGACCACCGGCTGAACACTTGGTGGCACAGAACCATGAGATTGTTCAGTTTTGCTTAACCAGAGGCTTTGATTTCAAGCTATACTTTCCTCACTACCTCTCACGGGAGGATTGGATCAAACACTTTGGGAATCAATGGACCAGATTTGTCGAGAGAAAGGCCAGTTTTGATCCCATGGCTATCCTTGCACCTGGACAGAAAATTTTCTCTAGAGTCCCTCAACCTTATTCTGTCACATAA 1527 0.5305 MTRNRWRQKTTTSLPSRKRWASQSLTDDCGIASKDFGGMKSVKPLALVRPATADDVALAVTAAARSPTLTVAARGNGHSINGQAMAEQGLVLDMRAMEERIQLVRIDGSPYVDVSGGALWEDVLKRCVSEFGLAPRSWTDYLSLTVGGTLSYAGVSGQAFRYGPQTSNVTELEVVTGKGDTLVCSATQNSELFFGVLGGLGQFGVITRARVVLQQAPDMVRWIRVVYCEFEEFSEDAESLVAAEVGESFDYVEGFVVVNSNDPANGWPTVPLDPQQVFDPRYIPSTAGPVLYCLELALHHCCNTDKPSHVDADVDRLLGRLRFVKGLKFQVDMRYMEFLLRVKRVEEQAMANGIWGAPHPWLNLFVSKSNIAEFDREVFKNILKKGVDGPILVYPLLRNKWDSRHSVVVPDSDIFYIVALLRFTPPPPKGPPAEHLVAQNHEIVQFCLTRGFDFKLYFPHYLSREDWIKHFGNQWTRFVERKASFDPMAILAPGQKIFSRVPQPYSVT* 509
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod09g1934 508 ProSiteProfiles PCMH-type FAD-binding domain profile. 40 216 IPR016166 GO:0071949
Dod09g1934 508 Pfam Cytokinin dehydrogenase 1, FAD and cytokinin binding 217 498 IPR015345 GO:0009690|GO:0019139|GO:0050660
Dod09g1934 508 Gene3D - 220 457 IPR016170 -
Dod09g1934 508 SUPERFAMILY FAD-linked oxidases, C-terminal domain 217 498 IPR016164 GO:0003824|GO:0050660
Dod09g1934 508 PANTHER GULONOLACTONE OXIDASE 20 503 - -
Dod09g1934 508 Pfam FAD binding domain 44 185 IPR006094 GO:0050660
Dod09g1934 508 Gene3D - 94 218 IPR016169 -
Dod09g1934 508 PANTHER CYTOKININ DEHYDROGENASE 7 20 503 - -
Dod09g1934 508 SUPERFAMILY FAD-binding/transporter-associated domain-like 31 213 IPR036318 GO:0050660
Dod09g1934 508 Gene3D - 32 499 IPR016167 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod09g1934 Dod-Chr9 40871602 40875763 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod09g1934 K00279 - gmx:100795849 776.163
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod09g1934 09 40871602 40875763 Dod09g1934 09 40871602 40875763 ECH